Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | WOC69_RS12120 | Genome accession | NZ_CP150744 |
| Coordinates | 2453413..2453808 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain TUM22702 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2448413..2458808
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WOC69_RS12090 (WOC69_12090) | - | 2449671..2450075 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| WOC69_RS12095 (WOC69_12095) | - | 2450413..2450505 (+) | 93 | WP_001790611.1 | hypothetical protein | - |
| WOC69_RS12100 (WOC69_12100) | - | 2450637..2450870 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| WOC69_RS12105 (WOC69_12105) | murA | 2450981..2452246 (+) | 1266 | WP_000358006.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| WOC69_RS12110 (WOC69_12110) | fabZ | 2452280..2452720 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| WOC69_RS12115 (WOC69_12115) | - | 2452779..2453219 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| WOC69_RS12120 (WOC69_12120) | ssb | 2453413..2453808 (+) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| WOC69_RS12125 (WOC69_12125) | sceD | 2454197..2454892 (+) | 696 | WP_000752005.1 | lytic transglycosylase SceD | - |
| WOC69_RS12130 (WOC69_12130) | tenA | 2455279..2455968 (+) | 690 | WP_000396077.1 | thiaminase II | - |
| WOC69_RS12135 (WOC69_12135) | thiD | 2455961..2456791 (+) | 831 | WP_000594954.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| WOC69_RS12140 (WOC69_12140) | thiM | 2456775..2457566 (+) | 792 | WP_001108483.1 | hydroxyethylthiazole kinase | - |
| WOC69_RS12145 (WOC69_12145) | thiE | 2457568..2458209 (+) | 642 | WP_000483153.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=971671 WOC69_RS12120 WP_000932694.1 2453413..2453808(+) (ssb) [Staphylococcus aureus strain TUM22702]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=971671 WOC69_RS12120 WP_000932694.1 2453413..2453808(+) (ssb) [Staphylococcus aureus strain TUM22702]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |