Detailed information NTG0971408

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: ACJX2R_RS20000
• Genome accession: NZ_CP178360
• Coordinates: 4764058..4764714 (-)
• Length: 218 a.a.
• NCBI ID: WP_037945933.1
• Uniprot ID: A0ABP4HWU7
• Organism: Streptomyces sp. Inha503
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 4759058..4769714

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACJX2R_RS19980 (ACJX2R_20055)	-	4759600..4760535 (+)	936	WP_262699986.1	hypothetical protein	-
ACJX2R_RS19985 (ACJX2R_20060)	-	4760590..4761582 (+)	993	WP_413101239.1	hypothetical protein	-
ACJX2R_RS19990 (ACJX2R_20065)	-	4761641..4762483 (+)	843	WP_413101240.1	hypothetical protein	-
ACJX2R_RS19995 (ACJX2R_20070)	clpX	4762590..4763876 (-)	1287	WP_037945935.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
ACJX2R_RS20000 (ACJX2R_20075)	clpP	4764058..4764714 (-)	657	WP_037945933.1	ATP-dependent Clp protease proteolytic subunit	Regulator
ACJX2R_RS20005 (ACJX2R_20080)	clpP	4764776..4765378 (-)	603	WP_171072767.1	ATP-dependent Clp protease proteolytic subunit	Regulator
ACJX2R_RS20010 (ACJX2R_20085)	tig	4765670..4767106 (-)	1437	WP_413101241.1	trigger factor	-
ACJX2R_RS20025 (ACJX2R_20100)	-	4767722..4767916 (-)	195	WP_413101242.1	hypothetical protein	-
ACJX2R_RS20030 (ACJX2R_20105)	-	4768533..4769714 (+)	1182	WP_413101243.1	acyltransferase family protein	-

Sequence

Protein

• Length: 218 a.a.
• Molecular weight: 23911.27 Da
• Isoelectric Point: 4.5997

>NTDB_id=971408 ACJX2R_RS20000 WP_037945933.1 4764058..4764714(-) (clpP) [Streptomyces sp. Inha503]
MSNFPGSGLYTGPMAESRYVVPRFVERTSQGIREYDPYAKLFEERVIFLGVQIDDASANDVMAQLLCLESMDPDRDISVY
INSPGGSFTALTAIYDTMQFVKPDIQTVCMGQAASAAAVLLAAGTPGKRMALPNARILIHQPYSETGRGQVSDLEIAANE
ILRMRSQLEEMLAKHSTTPIEKIRDDIERDKILTAEESLAYGLVDQIVSTRKTSVGLG

Nucleotide

• Length: 657 bp

>NTDB_id=971408 ACJX2R_RS20000 WP_037945933.1 4764058..4764714(-) (clpP) [Streptomyces sp. Inha503]
ATGAGCAACTTCCCCGGCAGCGGCCTGTACACCGGCCCGATGGCCGAATCCCGCTATGTCGTTCCGCGTTTCGTCGAGCG
CACCTCCCAGGGCATCCGCGAGTACGACCCGTACGCCAAGCTCTTCGAAGAGCGCGTGATCTTCCTTGGCGTCCAGATCG
ACGACGCCTCCGCCAACGACGTCATGGCGCAGCTGCTGTGCCTGGAGTCGATGGACCCGGACCGTGACATTTCGGTCTAC
ATCAACTCTCCCGGCGGCTCGTTCACCGCGCTGACCGCCATCTACGACACGATGCAGTTCGTCAAGCCCGACATCCAGAC
GGTGTGCATGGGCCAGGCGGCGTCCGCCGCGGCCGTGCTGCTCGCCGCCGGAACGCCGGGCAAGCGGATGGCCCTGCCCA
ATGCCCGGATCCTGATCCACCAGCCGTACAGTGAGACCGGGCGCGGTCAGGTCTCCGACCTGGAGATCGCGGCCAACGAG
ATCCTGCGGATGCGCTCGCAGCTCGAGGAGATGCTGGCCAAGCACTCCACGACGCCCATCGAGAAGATCCGCGACGACAT
CGAGCGGGACAAGATCCTCACGGCCGAGGAGTCCCTGGCGTACGGTCTTGTCGACCAGATCGTCTCCACCCGTAAGACGT
CGGTCGGCCTCGGCTGA

Domains

Predicted by InterProScan.

• Clp protease (CLP_protease) (30-210)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	50.526	87.156	0.44
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.936	86.239	0.422
clpP	Streptococcus thermophilus LMD-9	45.361	88.991	0.404
clpP	Streptococcus pyogenes JRS4	45.361	88.991	0.404
clpP	Streptococcus pyogenes MGAS315	45.361	88.991	0.404
clpP	Streptococcus thermophilus LMG 18311	45.361	88.991	0.404
clpP	Streptococcus mutans UA159	44	91.743	0.404
clpP	Lactococcus lactis subsp. cremoris KW2	45.55	87.615	0.399
clpP	Streptococcus pneumoniae R6	44.56	88.532	0.394
clpP	Streptococcus pneumoniae TIGR4	44.56	88.532	0.394
clpP	Streptococcus pneumoniae D39	44.56	88.532	0.394
clpP	Streptococcus pneumoniae Rx1	44.56	88.532	0.394
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	44.503	87.615	0.39