Detailed information NTG0971407

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: ACJX2R_RS19995
• Genome accession: NZ_CP178360
• Coordinates: 4762590..4763876 (-)
• Length: 428 a.a.
• NCBI ID: WP_037945935.1
• Uniprot ID: A0ABN1X9C2
• Organism: Streptomyces sp. Inha503
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 4757590..4768876

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACJX2R_RS19980 (ACJX2R_20055)	-	4759600..4760535 (+)	936	WP_262699986.1	hypothetical protein	-
ACJX2R_RS19985 (ACJX2R_20060)	-	4760590..4761582 (+)	993	WP_413101239.1	hypothetical protein	-
ACJX2R_RS19990 (ACJX2R_20065)	-	4761641..4762483 (+)	843	WP_413101240.1	hypothetical protein	-
ACJX2R_RS19995 (ACJX2R_20070)	clpX	4762590..4763876 (-)	1287	WP_037945935.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
ACJX2R_RS20000 (ACJX2R_20075)	clpP	4764058..4764714 (-)	657	WP_037945933.1	ATP-dependent Clp protease proteolytic subunit	Regulator
ACJX2R_RS20005 (ACJX2R_20080)	clpP	4764776..4765378 (-)	603	WP_171072767.1	ATP-dependent Clp protease proteolytic subunit	Regulator
ACJX2R_RS20010 (ACJX2R_20085)	tig	4765670..4767106 (-)	1437	WP_413101241.1	trigger factor	-
ACJX2R_RS20025 (ACJX2R_20100)	-	4767722..4767916 (-)	195	WP_413101242.1	hypothetical protein	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46852.58 Da
• Isoelectric Point: 4.8340

>NTDB_id=971407 ACJX2R_RS19995 WP_037945935.1 4762590..4763876(-) (clpX) [Streptomyces sp. Inha503]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEA
AKKALSVAVYNHYKRVQAGENGGHNRDDGIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGEDV
ENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQI
DTTNVLFIVGGAFAGLEKIIEARAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVITSVHNLDRE
ALLQILVEPRNALVKQYQRLFELDGVELDFDRPALEAIADQAILRGTGARGLRAIIEEVLMSAMYEVPSRKDVARVVITE
DVVHSNVNPTLVPRTRGTEPGERHEKSA

Nucleotide

• Length: 1287 bp

>NTDB_id=971407 ACJX2R_RS19995 WP_037945935.1 4762590..4763876(-) (clpX) [Streptomyces sp. Inha503]
GTGGCACGCATCGGTGACGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGGAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCGGGCCCGGGTGTGTACATCTGCGATGAATGCATCGATCTCTGCAACGAGATCATCGAGGAGGAGCTCGCCGAGACCT
CCGAAGTGCGCTGGGAGGAACTCCCCAAGCCGCGCGAGATCTATGAATTCCTCGAGGGCTATGTGGTCGGCCAGGAGGCC
GCCAAGAAGGCCCTCTCGGTCGCCGTCTACAACCACTACAAGCGGGTTCAGGCGGGCGAGAACGGCGGCCACAACCGCGA
CGACGGCATCGAGTTGGCCAAGTCCAACATCCTGCTGCTCGGCCCCACCGGCTCCGGCAAGACCCTGCTCGCGCAGACCC
TCGCCCGGATGCTCAACGTGCCCTTCGCCATCGCCGATGCCACCGCGCTCACCGAGGCGGGCTATGTCGGCGAGGACGTG
GAGAACATCCTCCTCAAGCTGATCCAGGCCGCCGACTACGACGTCAAGAAGGCCGAGACGGGCATCATCTACATCGACGA
GATCGACAAGGTGGCCCGCAAGAGCGAGAACCCCTCGATCACCCGTGATGTGTCCGGCGAGGGCGTTCAGCAGGCGCTGC
TGAAGATCCTGGAAGGGACCACGGCGTCGGTGCCGCCGCAGGGCGGCCGGAAACACCCGCACCAGGAGTTCATCCAGATC
GACACCACGAATGTGCTGTTCATCGTGGGCGGCGCCTTCGCCGGTCTGGAGAAGATCATCGAGGCGCGGGCGGGCGCCAA
GGGCATTGGATTCGGCGCCACGATCCGCTCCAAGCGCGAGATCGAGGCGAGCGACCAGTTCCAGGAGGTCATGCCCGAGG
ACCTGGTGAAGTTCGGAATGATCCCGGAATTCATCGGCCGTCTCCCGGTCATCACCTCCGTCCACAACCTCGACCGCGAG
GCGCTGCTGCAAATCCTCGTCGAACCGCGGAACGCCCTGGTGAAGCAGTACCAGCGGCTGTTCGAGCTCGACGGGGTGGA
GCTGGACTTCGACCGCCCGGCCCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCGGCACCGGGGCCCGGGGCCTGCGCG
CGATCATCGAGGAGGTGCTGATGTCGGCGATGTACGAGGTGCCGTCCCGCAAGGACGTGGCCCGCGTCGTCATCACCGAG
GACGTCGTGCACTCCAATGTGAACCCCACGCTGGTGCCCCGCACCCGCGGCACCGAGCCGGGCGAGCGGCACGAGAAGAG
CGCCTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (317-394)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (114-311)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.84	93.692	0.598
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.146	95.794	0.519