Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | OO774_RS11155 | Genome accession | NZ_AP026763 |
| Coordinates | 2385256..2385540 (-) | Length | 94 a.a. |
| NCBI ID | WP_264906106.1 | Uniprot ID | - |
| Organism | Vibrio sp. STUT-A11 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2380256..2390540
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OO774_RS11130 (VspSTUT11_21050) | - | 2380762..2381976 (+) | 1215 | WP_264902469.1 | pyridoxal phosphate-dependent aminotransferase | - |
| OO774_RS11135 (VspSTUT11_21060) | yfbR | 2382067..2382651 (+) | 585 | WP_264902470.1 | 5'-deoxynucleotidase | - |
| OO774_RS11140 (VspSTUT11_21070) | - | 2382675..2383997 (+) | 1323 | WP_264902471.1 | anti-phage deoxyguanosine triphosphatase | - |
| OO774_RS11145 (VspSTUT11_21080) | - | 2383994..2384617 (-) | 624 | WP_264902472.1 | DTW domain-containing protein | - |
| OO774_RS11150 (VspSTUT11_21090) | rrtA | 2384621..2385172 (+) | 552 | WP_264902473.1 | rhombosortase | - |
| OO774_RS11155 (VspSTUT11_21100) | comEA | 2385256..2385540 (-) | 285 | WP_264906106.1 | ComEA family DNA-binding protein | Machinery gene |
| OO774_RS11160 (VspSTUT11_21110) | ppiD | 2385727..2387586 (-) | 1860 | WP_264902475.1 | peptidylprolyl isomerase | - |
| OO774_RS11165 (VspSTUT11_21120) | - | 2387790..2388062 (-) | 273 | WP_264902477.1 | HU family DNA-binding protein | - |
Sequence
Protein
Download Length: 94 a.a. Molecular weight: 10212.85 Da Isoelectric Point: 5.8347
>NTDB_id=96818 OO774_RS11155 WP_264906106.1 2385256..2385540(-) (comEA) [Vibrio sp. STUT-A11]
MKWVLTLLLCVFTPFGLAADTTADKYEGIEITVNINSATAEEIATMLKGIGEKKAQDIVDYRSEHGPFKTVSDLGKVKGI
GDATLKKNEGRIIL
MKWVLTLLLCVFTPFGLAADTTADKYEGIEITVNINSATAEEIATMLKGIGEKKAQDIVDYRSEHGPFKTVSDLGKVKGI
GDATLKKNEGRIIL
Nucleotide
Download Length: 285 bp
>NTDB_id=96818 OO774_RS11155 WP_264906106.1 2385256..2385540(-) (comEA) [Vibrio sp. STUT-A11]
ATGAAATGGGTTTTGACTTTATTGTTATGCGTGTTTACACCATTTGGGTTGGCGGCAGATACAACAGCGGATAAATATGA
AGGAATTGAAATTACCGTAAACATCAATTCAGCGACAGCAGAAGAGATTGCAACAATGCTTAAAGGGATTGGTGAAAAGA
AAGCGCAGGACATTGTGGACTATCGTTCCGAGCATGGGCCATTCAAAACAGTGAGTGACCTTGGGAAGGTTAAGGGGATC
GGAGATGCTACTTTGAAGAAAAACGAAGGTCGCATCATCCTCTAG
ATGAAATGGGTTTTGACTTTATTGTTATGCGTGTTTACACCATTTGGGTTGGCGGCAGATACAACAGCGGATAAATATGA
AGGAATTGAAATTACCGTAAACATCAATTCAGCGACAGCAGAAGAGATTGCAACAATGCTTAAAGGGATTGGTGAAAAGA
AAGCGCAGGACATTGTGGACTATCGTTCCGAGCATGGGCCATTCAAAACAGTGAGTGACCTTGGGAAGGTTAAGGGGATC
GGAGATGCTACTTTGAAGAAAAACGAAGGTCGCATCATCCTCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
79.787 |
100 |
0.798 |
| comEA | Vibrio campbellii strain DS40M4 |
71.579 |
100 |
0.723 |
| comEA | Vibrio cholerae C6706 |
57.447 |
100 |
0.574 |
| comEA | Vibrio cholerae strain A1552 |
57.447 |
100 |
0.574 |
| comE | Neisseria gonorrhoeae MS11 |
43.182 |
93.617 |
0.404 |
| comE | Neisseria gonorrhoeae MS11 |
43.182 |
93.617 |
0.404 |
| comE | Neisseria gonorrhoeae MS11 |
43.182 |
93.617 |
0.404 |
| comE | Neisseria gonorrhoeae MS11 |
43.182 |
93.617 |
0.404 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
56.452 |
65.957 |
0.372 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
56.452 |
65.957 |
0.372 |
| comEA | Acinetobacter baylyi ADP1 |
52.239 |
71.277 |
0.372 |