Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | WJM28_RS16820 | Genome accession | NZ_CP149125 |
| Coordinates | 3669070..3669387 (+) | Length | 105 a.a. |
| NCBI ID | WP_043156043.1 | Uniprot ID | A0A3S5Z5K4 |
| Organism | Aeromonas caviae strain BE3 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3664070..3674387
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WJM28_RS16795 | - | 3664764..3665396 (-) | 633 | WP_039041319.1 | hemolysin III family protein | - |
| WJM28_RS16800 | - | 3665588..3667093 (+) | 1506 | WP_134997715.1 | aminotransferase class V-fold PLP-dependent enzyme | - |
| WJM28_RS16805 | - | 3667199..3667750 (+) | 552 | WP_102949208.1 | septation protein A | - |
| WJM28_RS16810 | - | 3667775..3668071 (+) | 297 | WP_010675539.1 | YciI family protein | - |
| WJM28_RS16815 | cysQ | 3668135..3668905 (-) | 771 | WP_134997714.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| WJM28_RS16820 | comEA | 3669070..3669387 (+) | 318 | WP_043156043.1 | ComEA family DNA-binding protein | Machinery gene |
| WJM28_RS16825 | galU | 3669482..3670393 (+) | 912 | WP_103243668.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| WJM28_RS16830 | - | 3670607..3672004 (+) | 1398 | WP_128344721.1 | peptide MFS transporter | - |
| WJM28_RS16835 | - | 3672075..3673046 (-) | 972 | WP_029314797.1 | response regulator | - |
| WJM28_RS16840 | - | 3673322..3673996 (+) | 675 | WP_069652184.1 | DnaT-like ssDNA-binding domain-containing protein | - |
Sequence
Protein
Download Length: 105 a.a. Molecular weight: 11006.90 Da Isoelectric Point: 10.1059
>NTDB_id=956685 WJM28_RS16820 WP_043156043.1 3669070..3669387(+) (comEA) [Aeromonas caviae strain BE3]
MNKKTLIAALLLGCLPLLSQPLLAADKAATKPVATTQVKESGKINLNTASASELTALKGIGEKKAQAIIDHREKQGKFTS
VDQLADVSGIGPATLEANRDMIIVK
MNKKTLIAALLLGCLPLLSQPLLAADKAATKPVATTQVKESGKINLNTASASELTALKGIGEKKAQAIIDHREKQGKFTS
VDQLADVSGIGPATLEANRDMIIVK
Nucleotide
Download Length: 318 bp
>NTDB_id=956685 WJM28_RS16820 WP_043156043.1 3669070..3669387(+) (comEA) [Aeromonas caviae strain BE3]
ATGAACAAGAAGACCCTGATCGCCGCACTGCTGCTGGGCTGCCTCCCCCTGTTGAGCCAACCTCTGCTGGCCGCCGACAA
GGCGGCGACCAAGCCTGTGGCCACCACCCAAGTCAAGGAAAGCGGCAAGATCAATCTCAATACCGCCAGTGCCAGCGAGC
TCACCGCCCTGAAAGGCATTGGCGAGAAGAAGGCACAGGCCATCATCGACCACAGGGAGAAGCAGGGCAAGTTCACCTCC
GTCGATCAACTGGCGGACGTCAGTGGCATCGGACCTGCCACGCTGGAAGCAAACCGGGACATGATTATCGTCAAGTAA
ATGAACAAGAAGACCCTGATCGCCGCACTGCTGCTGGGCTGCCTCCCCCTGTTGAGCCAACCTCTGCTGGCCGCCGACAA
GGCGGCGACCAAGCCTGTGGCCACCACCCAAGTCAAGGAAAGCGGCAAGATCAATCTCAATACCGCCAGTGCCAGCGAGC
TCACCGCCCTGAAAGGCATTGGCGAGAAGAAGGCACAGGCCATCATCGACCACAGGGAGAAGCAGGGCAAGTTCACCTCC
GTCGATCAACTGGCGGACGTCAGTGGCATCGGACCTGCCACGCTGGAAGCAAACCGGGACATGATTATCGTCAAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
50 |
100 |
0.505 |
| comEA | Vibrio cholerae strain A1552 |
50 |
100 |
0.505 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
47.664 |
100 |
0.486 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
45.946 |
100 |
0.486 |
| comEA | Legionella pneumophila strain ERS1305867 |
44 |
95.238 |
0.419 |
| comEA | Legionella pneumophila str. Paris |
44 |
95.238 |
0.419 |
| comEA/celA/cilE | Streptococcus mitis NCTC 12261 |
51.852 |
77.143 |
0.4 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
43.75 |
91.429 |
0.4 |
| comEA/celA/cilE | Streptococcus mitis SK321 |
54.795 |
69.524 |
0.381 |
| comEA | Acinetobacter baylyi ADP1 |
46.914 |
77.143 |
0.362 |