Detailed information NTG0948372

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: WDV80_RS05680
• Genome accession: NZ_CP147733
• Coordinates: 1151235..1151630 (-)
• Length: 131 a.a.
• NCBI ID: WP_000282447.1
• Uniprot ID: A0AAV3JLT6
• Organism: Streptococcus agalactiae strain SagR272_TC
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 1146235..1156630

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WDV80_RS05655 (WDV80_05655)	lrgB	1146620..1147348 (-)	729	WP_000421726.1	antiholin-like protein LrgB	-
WDV80_RS05660 (WDV80_05660)	-	1147350..1147805 (-)	456	WP_000683316.1	CidA/LrgA family protein	-
WDV80_RS05665 (WDV80_05665)	-	1147975..1148715 (-)	741	WP_000697630.1	LytTR family transcriptional regulator DNA-binding domain-containing protein	-
WDV80_RS05670 (WDV80_05670)	-	1148696..1150441 (-)	1746	WP_000930334.1	LytS/YhcK type 5TM receptor domain-containing protein	-
WDV80_RS05675 (WDV80_05675)	-	1150468..1151112 (-)	645	WP_000416612.1	HAD family hydrolase	-
WDV80_RS05680 (WDV80_05680)	ssbA	1151235..1151630 (-)	396	WP_000282447.1	single-stranded DNA-binding protein	Machinery gene
WDV80_RS05685 (WDV80_05685)	-	1151711..1152427 (+)	717	WP_000186185.1	class I SAM-dependent methyltransferase	-
WDV80_RS05690 (WDV80_05690)	ytpR	1152447..1153073 (-)	627	WP_000578328.1	YtpR family tRNA-binding protein	-
WDV80_RS05695 (WDV80_05695)	-	1153106..1153429 (-)	324	WP_000602781.1	thioredoxin family protein	-
WDV80_RS05700 (WDV80_05700)	-	1153426..1153710 (-)	285	WP_000791272.1	DUF4651 domain-containing protein	-
WDV80_RS05705 (WDV80_05705)	-	1153871..1154110 (+)	240	WP_000660180.1	hypothetical protein	-
WDV80_RS05710 (WDV80_05710)	pepA	1154295..1155362 (+)	1068	WP_001281323.1	glutamyl aminopeptidase	-
WDV80_RS05715 (WDV80_05715)	proC	1155432..1156202 (+)	771	WP_001865901.1	pyrroline-5-carboxylate reductase	-

Sequence

Protein

• Length: 131 a.a.
• Molecular weight: 14774.80 Da
• Isoelectric Point: 7.0189

>NTDB_id=948372 WDV80_RS05680 WP_000282447.1 1151235..1151630(-) (ssbA) [Streptococcus agalactiae strain SagR272_TC]
MYNKVIMIGRLTAKPEMVKTPTDKSVTRATVAVNRRFKGSNGEREADFINVVMWGRLAETLASYGTKGSLISIDGELRTR
KYEKDGQTHYITEVLASSFQLLESRAQRAMRENNVSGDLSDLVLEEEELPF

Nucleotide

• Length: 396 bp

>NTDB_id=948372 WDV80_RS05680 WP_000282447.1 1151235..1151630(-) (ssbA) [Streptococcus agalactiae strain SagR272_TC]
ATGTATAATAAAGTTATTATGATTGGGCGTCTAACAGCAAAGCCTGAGATGGTAAAAACACCAACTGACAAGTCAGTGAC
GCGTGCAACTGTTGCTGTTAATAGACGCTTTAAAGGAAGTAATGGTGAGCGTGAAGCAGATTTTATTAATGTGGTTATGT
GGGGTCGTCTAGCGGAAACCCTTGCGAGCTATGGGACAAAGGGCTCTTTAATTTCAATAGATGGTGAATTGCGTACGCGC
AAGTACGAAAAGGATGGTCAAACGCACTATATCACTGAAGTATTAGCATCATCATTTCAGTTGCTAGAAAGCCGTGCCCA
ACGTGCTATGCGTGAAAATAACGTTTCTGGTGATTTGTCAGATTTAGTATTGGAAGAAGAGGAGCTCCCCTTTTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (3-102)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Streptococcus mutans UA159	80.916	100	0.809
ssbB/cilA	Streptococcus pneumoniae R6	77.863	100	0.779
ssbB/cilA	Streptococcus pneumoniae Rx1	77.863	100	0.779
ssbB/cilA	Streptococcus pneumoniae D39	77.863	100	0.779
ssbB/cilA	Streptococcus pneumoniae TIGR4	77.099	100	0.771
ssbB	Streptococcus sobrinus strain NIDR 6715-7	77.099	100	0.771
ssbB/cilA	Streptococcus mitis NCTC 12261	76.336	100	0.763
ssbB/cilA	Streptococcus mitis SK321	76.336	100	0.763
ssbB	Lactococcus lactis subsp. cremoris KW2	60.526	87.023	0.527
ssbA	Bacillus subtilis subsp. subtilis str. 168	50.943	80.916	0.412
ssb	Latilactobacillus sakei subsp. sakei 23K	46.018	86.26	0.397