Detailed information NTG0945495

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: WAA17_RS01980
• Genome accession: NZ_CP147000
• Coordinates: 419390..420538 (+)
• Length: 382 a.a.
• NCBI ID: WP_003156336.1
• Uniprot ID: -
• Organism: Bacillus velezensis isolate K8
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 414390..425538

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WAA17_RS01960 (WAA17_01960)	-	414787..415470 (-)	684	WP_015388709.1	ABC transporter ATP-binding protein	-
WAA17_RS01965 (WAA17_01965)	-	415485..416921 (-)	1437	WP_024084884.1	ABC transporter permease	-
WAA17_RS01970 (WAA17_01970)	-	417134..417817 (+)	684	WP_024084885.1	response regulator transcription factor	-
WAA17_RS01975 (WAA17_01975)	-	417804..419237 (+)	1434	WP_161625271.1	HAMP domain-containing sensor histidine kinase	-
WAA17_RS01980 (WAA17_01980)	rapC	419390..420538 (+)	1149	WP_003156336.1	Rap family tetratricopeptide repeat protein	Regulator
WAA17_RS01985 (WAA17_01985)	phrC	420522..420641 (+)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
WAA17_RS01990 (WAA17_01990)	-	420791..420886 (-)	96	WP_012116800.1	YjcZ family sporulation protein	-
WAA17_RS01995 (WAA17_01995)	-	420981..422345 (-)	1365	WP_003156333.1	aspartate kinase	-
WAA17_RS02000 (WAA17_02000)	ceuB	422760..423713 (+)	954	WP_003156332.1	ABC transporter permease	Machinery gene
WAA17_RS02005 (WAA17_02005)	-	423703..424650 (+)	948	WP_003156331.1	iron chelate uptake ABC transporter family permease subunit	-
WAA17_RS02010 (WAA17_02010)	-	424644..425402 (+)	759	WP_003156330.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45521.82 Da
• Isoelectric Point: 5.0732

>NTDB_id=945495 WAA17_RS01980 WP_003156336.1 419390..420538(+) (rapC) [Bacillus velezensis isolate K8]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDRMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEEK
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=945495 WAA17_RS01980 WP_003156336.1 419390..420538(+) (rapC) [Bacillus velezensis isolate K8]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCGTATGGAGCCTGATTCAAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACGTATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCAGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTTTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTTGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
CCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAAAA
ATCAGCGCATGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAGATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.199	100	0.822
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568