Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | OCV52_RS04515 | Genome accession | NZ_AP025465 |
| Coordinates | 989037..989336 (+) | Length | 99 a.a. |
| NCBI ID | WP_061033659.1 | Uniprot ID | A0A7V7NV94 |
| Organism | Vibrio chagasii strain LMG 21353 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 984037..994336
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OCV52_RS04505 | - | 986479..986772 (+) | 294 | WP_012604504.1 | HU family DNA-binding protein | - |
| OCV52_RS04510 | ppiD | 986993..988858 (+) | 1866 | WP_137407322.1 | peptidylprolyl isomerase | - |
| OCV52_RS04515 | comEA | 989037..989336 (+) | 300 | WP_061033659.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| OCV52_RS04520 | rrtA | 989333..989875 (-) | 543 | WP_137407323.1 | rhombosortase | - |
| OCV52_RS04525 | - | 989885..990484 (+) | 600 | WP_137407324.1 | tRNA-uridine aminocarboxypropyltransferase | - |
| OCV52_RS04530 | - | 990520..991863 (-) | 1344 | WP_137407325.1 | anti-phage deoxyguanosine triphosphatase | - |
| OCV52_RS04535 | yfbR | 991915..992499 (-) | 585 | WP_137407326.1 | 5'-deoxynucleotidase | - |
| OCV52_RS04540 | - | 992670..993902 (-) | 1233 | WP_004739935.1 | pyridoxal phosphate-dependent aminotransferase | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 10676.19 Da Isoelectric Point: 4.3322
>NTDB_id=91729 OCV52_RS04515 WP_061033659.1 989037..989336(+) (comEA) [Vibrio chagasii strain LMG 21353]
MRTLYSTLLLSLLMFLSPTALADSPTKAELYDGIEVTVNINTATAEELSALLVGVGDKKAKDIVDYRTENGAFATADDLV
SVKGIGEATVEKNRERIQL
MRTLYSTLLLSLLMFLSPTALADSPTKAELYDGIEVTVNINTATAEELSALLVGVGDKKAKDIVDYRTENGAFATADDLV
SVKGIGEATVEKNRERIQL
Nucleotide
Download Length: 300 bp
>NTDB_id=91729 OCV52_RS04515 WP_061033659.1 989037..989336(+) (comEA) [Vibrio chagasii strain LMG 21353]
ATGCGCACTCTATACTCAACACTACTTCTTTCACTTCTGATGTTTTTAAGCCCTACAGCACTCGCAGACAGCCCAACTAA
GGCTGAGCTTTATGATGGCATTGAGGTTACGGTAAACATTAATACCGCGACCGCAGAAGAGCTATCAGCGTTACTGGTAG
GTGTGGGTGATAAGAAAGCCAAAGATATTGTCGACTATAGAACTGAGAACGGTGCATTTGCTACCGCTGACGATTTGGTG
AGTGTCAAAGGGATTGGTGAAGCAACGGTTGAGAAGAATCGCGAAAGAATACAGCTTTAG
ATGCGCACTCTATACTCAACACTACTTCTTTCACTTCTGATGTTTTTAAGCCCTACAGCACTCGCAGACAGCCCAACTAA
GGCTGAGCTTTATGATGGCATTGAGGTTACGGTAAACATTAATACCGCGACCGCAGAAGAGCTATCAGCGTTACTGGTAG
GTGTGGGTGATAAGAAAGCCAAAGATATTGTCGACTATAGAACTGAGAACGGTGCATTTGCTACCGCTGACGATTTGGTG
AGTGTCAAAGGGATTGGTGAAGCAACGGTTGAGAAGAATCGCGAAAGAATACAGCTTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
60.87 |
92.929 |
0.566 |
| comEA | Vibrio campbellii strain DS40M4 |
57.609 |
92.929 |
0.535 |
| comEA | Vibrio cholerae C6706 |
51.485 |
100 |
0.525 |
| comEA | Vibrio cholerae strain A1552 |
51.485 |
100 |
0.525 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
40.909 |
100 |
0.455 |
| comEA | Acinetobacter baylyi ADP1 |
51.22 |
82.828 |
0.424 |
| comEA | Acinetobacter baumannii strain A118 |
30.769 |
100 |
0.404 |
| comEA/celA/cilE | Streptococcus pneumoniae Rx1 |
38 |
100 |
0.384 |
| comEA/celA/cilE | Streptococcus pneumoniae D39 |
38 |
100 |
0.384 |
| comEA/celA/cilE | Streptococcus pneumoniae R6 |
38 |
100 |
0.384 |