Detailed information NTG0912336

Bioinformatically predicted

Overview

• Name: pilQ
• Type: Machinery gene
• Locus tag: U0040_RS01510
• Genome accession: NZ_CP140003
• Coordinates: 329784..331862 (+)
• Length: 692 a.a.
• NCBI ID: WP_114836328.1
• Uniprot ID: -
• Organism: Acinetobacter johnsonii strain HAMBI_0097
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 324784..336862

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
U0040_RS01490 (U0040_01490)	-	326789..327847 (+)	1059	Protein_287	pilus assembly protein PilM	-
U0040_RS01495 (U0040_01495)	comN	327847..328503 (+)	657	WP_004978083.1	PilN domain-containing protein	Machinery gene
U0040_RS01500 (U0040_01500)	pilO	328500..329237 (+)	738	WP_004978082.1	type 4a pilus biogenesis protein PilO	Machinery gene
U0040_RS01505 (U0040_01505)	pilP	329237..329764 (+)	528	WP_004978081.1	pilus assembly protein PilP	Machinery gene
U0040_RS01510 (U0040_01510)	pilQ	329784..331862 (+)	2079	WP_114836328.1	type IV pilus secretin PilQ	Machinery gene
U0040_RS01515 (U0040_01515)	aroK	331900..332433 (+)	534	WP_005401350.1	shikimate kinase AroK	-
U0040_RS01520 (U0040_01520)	aroB	332464..333549 (+)	1086	WP_005401349.1	3-dehydroquinate synthase	-
U0040_RS01525 (U0040_01525)	-	333557..334396 (+)	840	WP_005401348.1	hypothetical protein	-

Sequence

Protein

• Length: 692 a.a.
• Molecular weight: 75164.35 Da
• Isoelectric Point: 5.5025

>NTDB_id=912336 U0040_RS01510 WP_114836328.1 329784..331862(+) (pilQ) [Acinetobacter johnsonii strain HAMBI_0097]
MKNSAKDFIFGDGNTMNHMFRQFSMGAIAMAVMQAASAQVSITNIVPMQIPGQGTEIRVMFNGLPPQPQAYQLEQPSRLV
LDFDKAQQSLKQGSIAVATAEASTVDVTSAAQRSRLTVNLADAGAFTTRVEGNTFILKINSANPALATPVAAARSEQGIS
NIGFQRGSDGEGQVVIDLKGSNTPVDVKQQGSKIVVRVLGNKIPAHLSRRLNVNDFATPVSTTDAQNDGSNGLITIQSNG
SFEYMAYQAEDKLTISLKRPEDKNPMKPKAPSAYTGKKISLDFQDIEVRRVLQLLADFTGINMVASDTVQGNITLRLKDV
PWDQALDIIMKTKNLDKRRNGNVIWIAPVAELIKSEEEEAKAIAQSIKLSPIQTDYIQLSYAKSADVLKLLEDSRDSKGG
ESNRTAGSDSLALESLLSARGSAVSDSRTNTLIINDTQQNIDKIRRMIDLLDVAVKQVMVEARIVTASTDFSRELGIKWS
AKKLGNSPVWGGDFQPSFDLGVDLATNTAGTFNFGLLKISDYMLNLELSALQADGHGEVLSAPKVLTGDKQKAYILRGTE
IPYQTWSATEGLKTEFRAANLKLEVTPSITPDGKVQMALKIEKDTVGTLTSVGYLINTNELETNVLVDDGETVVLGGIFD
DIKQNQYEKVPFFGDLPVVGALFKNNTRSSAQTELLIFVTPRIVNDSVSRNH

Nucleotide

• Length: 2079 bp

>NTDB_id=912336 U0040_RS01510 WP_114836328.1 329784..331862(+) (pilQ) [Acinetobacter johnsonii strain HAMBI_0097]
ATGAAAAATAGTGCTAAAGATTTTATATTTGGGGATGGCAATACGATGAACCATATGTTCCGTCAGTTTTCAATGGGTGC
AATTGCAATGGCGGTGATGCAGGCTGCAAGTGCGCAAGTCAGTATTACGAATATTGTGCCGATGCAAATTCCGGGACAGG
GAACAGAAATTCGTGTCATGTTCAACGGTTTGCCACCACAGCCGCAAGCCTATCAGTTGGAACAGCCATCACGTTTGGTT
TTGGATTTTGATAAAGCGCAGCAGAGCTTAAAACAAGGCAGTATTGCGGTGGCAACGGCTGAAGCAAGTACAGTAGATGT
AACTTCAGCTGCGCAGCGTTCACGTTTAACTGTAAATTTGGCTGATGCTGGTGCATTTACTACACGTGTTGAAGGTAATA
CTTTTATTCTGAAAATTAACTCAGCGAACCCAGCGCTAGCAACACCTGTTGCTGCAGCGCGTTCAGAGCAAGGTATTTCA
AATATTGGATTCCAACGTGGTTCAGACGGCGAAGGCCAAGTTGTCATTGATTTAAAAGGTAGCAATACCCCTGTCGATGT
GAAACAACAAGGCAGTAAAATTGTGGTGCGCGTTTTGGGGAATAAAATTCCTGCCCACTTATCGCGCCGTCTCAATGTGA
ATGATTTCGCAACGCCTGTATCGACCACTGATGCACAAAATGATGGCAGTAACGGCCTGATCACGATCCAATCGAATGGC
AGTTTTGAATATATGGCTTATCAGGCAGAAGATAAGCTCACCATTAGTTTAAAGCGTCCTGAAGATAAAAATCCAATGAA
GCCTAAAGCACCAAGTGCTTATACGGGCAAAAAGATTTCTTTAGATTTCCAAGATATTGAAGTACGCCGTGTATTACAGC
TCTTAGCTGATTTTACAGGCATTAACATGGTGGCCTCGGATACGGTACAAGGTAATATTACCTTGCGCCTTAAAGATGTA
CCTTGGGATCAGGCACTTGATATCATAATGAAAACCAAGAATTTGGATAAGCGACGCAATGGTAATGTGATTTGGATTGC
ACCTGTAGCTGAGCTGATTAAATCTGAGGAAGAAGAGGCGAAAGCCATCGCGCAAAGTATTAAGCTTTCACCTATTCAAA
CCGATTATATTCAATTGAGTTATGCTAAATCGGCGGATGTACTGAAGTTATTGGAGGACTCTCGTGATAGTAAAGGAGGT
GAGTCGAACCGAACAGCGGGTTCAGACTCCTTAGCTTTGGAAAGTTTATTGAGTGCTCGTGGTAGTGCGGTTTCTGATTC
GCGTACCAATACTTTAATTATTAATGATACGCAGCAAAATATTGACAAGATTCGTCGCATGATTGACTTGCTGGATGTCG
CAGTTAAACAGGTGATGGTCGAAGCCCGTATTGTAACGGCGTCAACAGATTTTTCTCGCGAATTGGGGATTAAGTGGAGC
GCGAAGAAGCTGGGCAATAGCCCAGTATGGGGCGGAGATTTCCAGCCAAGTTTTGATTTGGGGGTGGATTTAGCAACAAA
CACGGCTGGTACGTTTAACTTTGGTTTACTGAAGATCTCAGATTATATGTTAAACCTTGAGTTAAGCGCACTTCAAGCGG
ATGGTCATGGTGAAGTGTTATCAGCACCTAAAGTACTGACTGGTGATAAACAGAAAGCCTATATCTTGCGTGGTACAGAG
ATTCCTTATCAAACATGGAGTGCGACGGAAGGCTTAAAAACCGAATTCCGTGCGGCTAACTTAAAGTTAGAGGTGACTCC
AAGTATCACCCCTGATGGTAAAGTTCAAATGGCGCTAAAAATTGAAAAAGATACAGTTGGTACACTAACATCAGTAGGGT
ATTTAATTAATACAAATGAACTTGAAACTAATGTTTTGGTTGATGATGGTGAAACAGTCGTACTTGGCGGTATTTTTGAT
GACATTAAGCAAAATCAATATGAGAAAGTTCCATTTTTTGGGGATTTGCCTGTAGTGGGTGCTTTATTTAAAAATAACAC
CAGATCTAGTGCGCAAACTGAGTTATTGATTTTTGTGACACCACGAATTGTTAATGACAGTGTTTCAAGAAATCATTAA

Domains

Predicted by InterproScan.

• AMIN domain (AMIN) (55-135)

• Secretin and TonB N terminus short domain (STN) (305-348)

• Bacterial type II/III secretion system short domain (Secretin_N) (376-457)

• Bacterial type II and III secretion system protein (Secretin) (530-684)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilQ	Acinetobacter baumannii D1279779	65.097	100	0.679
pilQ	Acinetobacter baumannii strain A118	64.958	100	0.678
comQ	Acinetobacter baylyi ADP1	62.025	100	0.637
pilQ	Pseudomonas aeruginosa PAK	39.451	100	0.395
pilQ	Legionella pneumophila strain Lp02	37.591	99.566	0.374
pilQ	Legionella pneumophila strain ERS1305867	37.87	97.688	0.37
pilQ	Neisseria gonorrhoeae strain FA1090	34.765	100	0.363