Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | OCU77_RS12355 | Genome accession | NZ_AP024852 |
| Coordinates | 2725194..2725478 (-) | Length | 94 a.a. |
| NCBI ID | WP_048899107.1 | Uniprot ID | A0A0J8XXU7 |
| Organism | Photobacterium swingsii strain CECT 7576 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2720194..2730478
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OCU77_RS12330 | - | 2720484..2721698 (+) | 1215 | WP_048899111.1 | pyridoxal phosphate-dependent aminotransferase | - |
| OCU77_RS12335 | yfbR | 2721873..2722457 (+) | 585 | WP_048899110.1 | 5'-deoxynucleotidase | - |
| OCU77_RS12340 | - | 2722457..2723824 (+) | 1368 | WP_048899109.1 | anti-phage deoxyguanosine triphosphatase | - |
| OCU77_RS12345 | - | 2723896..2724516 (-) | 621 | WP_107302905.1 | tRNA-uridine aminocarboxypropyltransferase | - |
| OCU77_RS12350 | rrtA | 2724526..2725080 (+) | 555 | WP_048899108.1 | rhombosortase | - |
| OCU77_RS12355 | comEA | 2725194..2725478 (-) | 285 | WP_048899107.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| OCU77_RS12360 | ppiD | 2725617..2727509 (-) | 1893 | WP_107302906.1 | peptidylprolyl isomerase | - |
| OCU77_RS12365 | hupB | 2727703..2727975 (-) | 273 | WP_048899106.1 | nucleoid-associated protein HU-beta | - |
Sequence
Protein
Download Length: 94 a.a. Molecular weight: 10246.85 Da Isoelectric Point: 4.8358
>NTDB_id=88816 OCU77_RS12355 WP_048899107.1 2725194..2725478(-) (comEA) [Photobacterium swingsii strain CECT 7576]
MKRLLVSALLCGAVLVALPVSANDSHEGIEITININDANAEELDKLLVGIGPEKAENIILYRKQYGDFKTADDLTKVKGI
GLATVEKNRDRIEL
MKRLLVSALLCGAVLVALPVSANDSHEGIEITININDANAEELDKLLVGIGPEKAENIILYRKQYGDFKTADDLTKVKGI
GLATVEKNRDRIEL
Nucleotide
Download Length: 285 bp
>NTDB_id=88816 OCU77_RS12355 WP_048899107.1 2725194..2725478(-) (comEA) [Photobacterium swingsii strain CECT 7576]
ATGAAACGTTTATTAGTCAGTGCATTACTATGTGGTGCGGTATTGGTGGCTTTACCTGTGAGTGCAAACGATAGTCATGA
AGGTATTGAGATAACCATTAATATTAACGATGCAAATGCTGAAGAGCTTGATAAGCTGTTGGTTGGCATTGGACCTGAAA
AAGCAGAAAATATCATCTTGTATCGAAAGCAATATGGTGATTTCAAAACGGCAGATGATCTAACAAAAGTGAAAGGCATT
GGCTTGGCAACGGTTGAGAAAAACCGCGACCGAATTGAGCTTTAA
ATGAAACGTTTATTAGTCAGTGCATTACTATGTGGTGCGGTATTGGTGGCTTTACCTGTGAGTGCAAACGATAGTCATGA
AGGTATTGAGATAACCATTAATATTAACGATGCAAATGCTGAAGAGCTTGATAAGCTGTTGGTTGGCATTGGACCTGAAA
AAGCAGAAAATATCATCTTGTATCGAAAGCAATATGGTGATTTCAAAACGGCAGATGATCTAACAAAAGTGAAAGGCATT
GGCTTGGCAACGGTTGAGAAAAACCGCGACCGAATTGAGCTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio campbellii strain DS40M4 |
54.737 |
100 |
0.553 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
53.608 |
100 |
0.553 |
| comEA | Vibrio cholerae C6706 |
48.454 |
100 |
0.5 |
| comEA | Vibrio cholerae strain A1552 |
48.454 |
100 |
0.5 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
40 |
100 |
0.468 |
| comE | Neisseria gonorrhoeae MS11 |
42.857 |
96.809 |
0.415 |
| comE | Neisseria gonorrhoeae MS11 |
42.857 |
96.809 |
0.415 |
| comE | Neisseria gonorrhoeae MS11 |
42.857 |
96.809 |
0.415 |
| comE | Neisseria gonorrhoeae MS11 |
42.857 |
96.809 |
0.415 |
| comEA | Acinetobacter baylyi ADP1 |
48 |
79.787 |
0.383 |
| comEA | Legionella pneumophila strain ERS1305867 |
33.333 |
100 |
0.362 |
| comEA | Legionella pneumophila str. Paris |
33.333 |
100 |
0.362 |