Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | Q7W79_RS11395 | Genome accession | NZ_CP131931 |
| Coordinates | 768742..769026 (+) | Length | 94 a.a. |
| NCBI ID | WP_021449594.1 | Uniprot ID | - |
| Organism | Vibrio parahaemolyticus strain RP0132 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 763742..774026
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Q7W79_RS11385 (Q7W79_11385) | - | 766260..766532 (+) | 273 | WP_005382341.1 | HU family DNA-binding protein | - |
| Q7W79_RS11390 (Q7W79_11390) | ppiD | 766732..768591 (+) | 1860 | WP_005482527.1 | peptidylprolyl isomerase | - |
| Q7W79_RS11395 (Q7W79_11395) | comEA | 768742..769026 (+) | 285 | WP_021449594.1 | ComEA family DNA-binding protein | Machinery gene |
| Q7W79_RS11400 (Q7W79_11400) | rrtA | 769117..769668 (-) | 552 | WP_005456916.1 | rhombosortase | - |
| Q7W79_RS11405 (Q7W79_11405) | - | 769672..770286 (+) | 615 | WP_273978898.1 | tRNA-uridine aminocarboxypropyltransferase | - |
| Q7W79_RS11410 (Q7W79_11410) | - | 770293..771627 (-) | 1335 | WP_041954079.1 | anti-phage deoxyguanosine triphosphatase | - |
| Q7W79_RS11415 (Q7W79_11415) | yfbR | 771640..772224 (-) | 585 | WP_005482513.1 | 5'-deoxynucleotidase | - |
| Q7W79_RS11420 (Q7W79_11420) | - | 772315..773529 (-) | 1215 | WP_005456922.1 | pyridoxal phosphate-dependent aminotransferase | - |
Sequence
Protein
Download Length: 94 a.a. Molecular weight: 10249.91 Da Isoelectric Point: 5.8425
>NTDB_id=866349 Q7W79_RS11395 WP_021449594.1 768742..769026(+) (comEA) [Vibrio parahaemolyticus strain RP0132]
MKWILTLCLVVFAPLSLAADTKADKYEGIEITVNINTASAEEIATMLKGIGEKKAQSIVDYRTEHGPFKTAADLTNVKGI
GEATIKKNEDRILL
MKWILTLCLVVFAPLSLAADTKADKYEGIEITVNINTASAEEIATMLKGIGEKKAQSIVDYRTEHGPFKTAADLTNVKGI
GEATIKKNEDRILL
Nucleotide
Download Length: 285 bp
>NTDB_id=866349 Q7W79_RS11395 WP_021449594.1 768742..769026(+) (comEA) [Vibrio parahaemolyticus strain RP0132]
ATGAAATGGATTTTAACCTTGTGTTTAGTGGTGTTCGCACCACTCAGTTTGGCCGCTGATACCAAGGCTGATAAATATGA
AGGAATTGAAATTACGGTCAATATCAATACTGCTTCTGCAGAAGAGATAGCAACGATGCTGAAAGGTATTGGCGAAAAGA
AAGCGCAAAGCATAGTTGACTACCGTACTGAGCACGGCCCATTTAAAACAGCAGCTGATTTAACCAATGTAAAAGGAATT
GGTGAAGCAACCATCAAGAAAAACGAAGACCGCATTCTTCTATAA
ATGAAATGGATTTTAACCTTGTGTTTAGTGGTGTTCGCACCACTCAGTTTGGCCGCTGATACCAAGGCTGATAAATATGA
AGGAATTGAAATTACGGTCAATATCAATACTGCTTCTGCAGAAGAGATAGCAACGATGCTGAAAGGTATTGGCGAAAAGA
AAGCGCAAAGCATAGTTGACTACCGTACTGAGCACGGCCCATTTAAAACAGCAGCTGATTTAACCAATGTAAAAGGAATT
GGTGAAGCAACCATCAAGAAAAACGAAGACCGCATTCTTCTATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
100 |
100 |
1 |
| comEA | Vibrio campbellii strain DS40M4 |
77.895 |
100 |
0.787 |
| comEA | Vibrio cholerae C6706 |
62.766 |
100 |
0.628 |
| comEA | Vibrio cholerae strain A1552 |
62.766 |
100 |
0.628 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
56.452 |
65.957 |
0.372 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
56.452 |
65.957 |
0.372 |
| comE | Neisseria gonorrhoeae MS11 |
38.889 |
95.745 |
0.372 |
| comE | Neisseria gonorrhoeae MS11 |
38.889 |
95.745 |
0.372 |
| comE | Neisseria gonorrhoeae MS11 |
38.889 |
95.745 |
0.372 |
| comE | Neisseria gonorrhoeae MS11 |
38.889 |
95.745 |
0.372 |
| comEA | Acinetobacter baylyi ADP1 |
47.222 |
76.596 |
0.362 |