Detailed information
Bioinformatically predicted
Overview
| Name | comEA/comE1 | Type | Machinery gene |
| Locus tag | JUNP479_RS08735 | Genome accession | NZ_AP024466 |
| Coordinates | 1959265..1959585 (+) | Length | 106 a.a. |
| NCBI ID | WP_203977447.1 | Uniprot ID | - |
| Organism | Aeromonas jandaei strain JUNP479 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1954265..1964585
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JUNP479_RS08720 (JUNP479_1773) | yfbV | 1954743..1955183 (-) | 441 | WP_005339116.1 | terminus macrodomain insulation protein YfbV | - |
| JUNP479_RS08725 (JUNP479_1774) | - | 1955488..1956690 (+) | 1203 | WP_005339118.1 | acetate kinase | - |
| JUNP479_RS08730 (JUNP479_1775) | pta | 1956746..1958926 (+) | 2181 | WP_041210398.1 | phosphate acetyltransferase | - |
| JUNP479_RS08735 (JUNP479_1776) | comEA/comE1 | 1959265..1959585 (+) | 321 | WP_203977447.1 | ComEA family DNA-binding protein | Machinery gene |
| JUNP479_RS08740 (JUNP479_1777) | galU | 1959681..1960592 (+) | 912 | WP_041210396.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| JUNP479_RS08745 (JUNP479_1778) | - | 1960806..1962203 (+) | 1398 | WP_042031806.1 | peptide MFS transporter | - |
| JUNP479_RS08750 (JUNP479_1779) | - | 1962292..1963263 (-) | 972 | WP_203977449.1 | response regulator | - |
| JUNP479_RS08755 (JUNP479_1780) | - | 1963503..1964192 (+) | 690 | WP_043851814.1 | DnaT-like ssDNA-binding domain-containing protein | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11352.30 Da Isoelectric Point: 10.0127
>NTDB_id=85236 JUNP479_RS08735 WP_203977447.1 1959265..1959585(+) (comEA/comE1) [Aeromonas jandaei strain JUNP479]
MRKNSLSIIMLLSALPLFTLPSLAADKVAPKQATTVAAKQEIGKVDINTATLTELTNLKGIGDKKAQAIVDYREKQGKFT
SVDQLVDVSGIGPATLEANRDMIIVK
MRKNSLSIIMLLSALPLFTLPSLAADKVAPKQATTVAAKQEIGKVDINTATLTELTNLKGIGDKKAQAIVDYREKQGKFT
SVDQLVDVSGIGPATLEANRDMIIVK
Nucleotide
Download Length: 321 bp
>NTDB_id=85236 JUNP479_RS08735 WP_203977447.1 1959265..1959585(+) (comEA/comE1) [Aeromonas jandaei strain JUNP479]
ATGCGTAAAAACAGCTTGTCCATCATCATGTTGTTGTCCGCCCTCCCGTTGTTCACCCTGCCCTCACTGGCCGCAGACAA
GGTCGCACCGAAGCAGGCCACCACGGTTGCCGCCAAGCAGGAGATCGGCAAAGTGGATATCAATACGGCAACCCTTACCG
AGCTCACCAACCTCAAGGGGATTGGCGACAAAAAGGCACAAGCCATCGTCGACTATCGCGAAAAACAGGGGAAATTTACC
TCTGTCGATCAACTGGTTGATGTAAGCGGCATCGGCCCGGCCACGCTGGAAGCCAACCGTGACATGATCATCGTCAAATA
A
ATGCGTAAAAACAGCTTGTCCATCATCATGTTGTTGTCCGCCCTCCCGTTGTTCACCCTGCCCTCACTGGCCGCAGACAA
GGTCGCACCGAAGCAGGCCACCACGGTTGCCGCCAAGCAGGAGATCGGCAAAGTGGATATCAATACGGCAACCCTTACCG
AGCTCACCAACCTCAAGGGGATTGGCGACAAAAAGGCACAAGCCATCGTCGACTATCGCGAAAAACAGGGGAAATTTACC
TCTGTCGATCAACTGGTTGATGTAAGCGGCATCGGCCCGGCCACGCTGGAAGCCAACCGTGACATGATCATCGTCAAATA
A
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
48.696 |
100 |
0.528 |
| comEA | Vibrio cholerae C6706 |
51.456 |
97.17 |
0.5 |
| comEA | Vibrio cholerae strain A1552 |
51.456 |
97.17 |
0.5 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
46.392 |
91.509 |
0.425 |
| comEA/celA/cilE | Streptococcus pneumoniae R6 |
40.385 |
98.113 |
0.396 |
| comEA/celA/cilE | Streptococcus pneumoniae Rx1 |
40.385 |
98.113 |
0.396 |
| comEA/celA/cilE | Streptococcus pneumoniae D39 |
40.385 |
98.113 |
0.396 |
| comEA/celA/cilE | Streptococcus mitis NCTC 12261 |
39.048 |
99.057 |
0.387 |
| comEA/celA/cilE | Streptococcus pneumoniae TIGR4 |
39.216 |
96.226 |
0.377 |