Detailed information NTG0843032

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: VYI58_RS01095
• Genome accession: NZ_CP142953
• Coordinates: 217594..218577 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196477.1
• Uniprot ID: A0A0H2VBW7
• Organism: Escherichia coli strain EC190759
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 212594..223577

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VYI58_RS01080 (VYI58_01080)	dppA	213738..215345 (+)	1608	WP_001222871.1	dipeptide ABC transporter substrate-binding protein DppA	-
VYI58_RS01085 (VYI58_01085)	dppB	215652..216671 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
VYI58_RS01090 (VYI58_01090)	dppC	216681..217583 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
VYI58_RS01095 (VYI58_01095)	amiE	217594..218577 (+)	984	WP_001196477.1	dipeptide ABC transporter ATP-binding protein	Regulator
VYI58_RS01100 (VYI58_01100)	dppF	218574..219587 (+)	1014	WP_000103572.1	dipeptide ABC transporter ATP-binding subunit DppF	-
VYI58_RS01105 (VYI58_01105)	-	219812..220135 (+)	324	WP_000563102.1	helix-turn-helix domain-containing protein	-
VYI58_RS01110 (VYI58_01110)	-	220120..220431 (+)	312	WP_001312177.1	HipA N-terminal domain-containing protein	-
VYI58_RS01115 (VYI58_01115)	-	220431..221438 (+)	1008	WP_001262467.1	type II toxin-antitoxin system HipA family toxin	-
VYI58_RS01120 (VYI58_01120)	yhjV	221455..222726 (-)	1272	WP_001545666.1	amino acid permease	-
VYI58_RS01125 (VYI58_01125)	-	223202..223309 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35801.38 Da
• Isoelectric Point: 6.5813

>NTDB_id=843032 VYI58_RS01095 WP_001196477.1 217594..218577(+) (amiE) [Escherichia coli strain EC190759]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=843032 VYI58_RS01095 WP_001196477.1 217594..218577(+) (amiE) [Escherichia coli strain EC190759]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGTGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAAGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCAACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATTATCGAACTGCTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATTATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

3D structure

• AlphaFold DB: A0A0H2VBW7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404