Detailed information    

insolico Bioinformatically predicted

Overview

Name   comP   Type   Regulator
Locus tag   QN340_RS20975 Genome accession   NZ_CP126496
Coordinates   4146510..4148042 (-) Length   510 a.a.
NCBI ID   WP_228119635.1    Uniprot ID   -
Organism   Bacillus paralicheniformis strain DY4     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 4141510..4153042
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QN340_RS20935 (QN340_20935) - 4141975..4142406 (+) 432 WP_003184834.1 Na(+)/H(+) antiporter subunit B -
  QN340_RS20940 (QN340_20940) - 4142406..4142747 (+) 342 WP_020452785.1 Na(+)/H(+) antiporter subunit C -
  QN340_RS20945 (QN340_20945) - 4142740..4144218 (+) 1479 WP_020452786.1 Na+/H+ antiporter subunit D -
  QN340_RS20950 (QN340_20950) - 4144224..4144700 (+) 477 WP_020452787.1 Na+/H+ antiporter subunit E -
  QN340_RS20955 (QN340_20955) - 4144700..4144984 (+) 285 WP_003184842.1 Na(+)/H(+) antiporter subunit F1 -
  QN340_RS20960 (QN340_20960) mnhG 4144968..4145342 (+) 375 WP_023856153.1 monovalent cation/H(+) antiporter subunit G -
  QN340_RS20965 (QN340_20965) - 4145379..4145768 (-) 390 WP_009329508.1 hotdog fold thioesterase -
  QN340_RS20970 (QN340_20970) comA 4145785..4146423 (-) 639 WP_003184849.1 response regulator transcription factor Regulator
  QN340_RS20975 (QN340_20975) comP 4146510..4148042 (-) 1533 WP_228119635.1 sensor histidine kinase Regulator
  QN340_RS20980 (QN340_20980) - 4148145..4149467 (-) 1323 WP_020452314.1 ISL3 family transposase -
  QN340_RS20985 (QN340_20985) - 4149460..4149672 (-) 213 WP_040037657.1 hypothetical protein -
  QN340_RS20990 (QN340_20990) - 4149704..4150414 (-) 711 WP_020452313.1 GAP family protein -
  QN340_RS20995 (QN340_20995) - 4150503..4151096 (+) 594 WP_020452312.1 TetR/AcrR family transcriptional regulator -
  QN340_RS21000 (QN340_21000) - 4151090..4151800 (-) 711 WP_183163973.1 hypothetical protein -
  QN340_RS21005 (QN340_21005) comX 4151929..4152099 (-) 171 WP_020452790.1 competence pheromone ComX -
  QN340_RS21010 (QN340_21010) - 4152071..4152982 (-) 912 WP_020452791.1 polyprenyl synthetase family protein -

Sequence

Protein


Download         Length: 510 a.a.        Molecular weight: 59081.25 Da        Isoelectric Point: 6.3280

>NTDB_id=838183 QN340_RS20975 WP_228119635.1 4146510..4148042(-) (comP) [Bacillus paralicheniformis strain DY4]
MKFKYSQQSYLLKILMLMNFIALVPFLFFYVLPMLVFGDYIFSAIVVSPFLLLIPLSLVYQFMSNKIYDIEFLIGRLKYY
SFLAIIPTSLIITILAIVKHQEGEFFTVQVTIFTYLIMVGVFYLKEIIDFRFRLKRFSEKFNYQDSIFKFTQTIRTFTSL
NQVLMELKQIVLDVLLVNNIYMLKVKNDGSVSMLENDAEEKPWIPYEQEVTKVITDIGKIVEVDRGFLIKIGERGGTSYV
MLCLSVLNTPRLTRDEISWLETLAFYTSVSLENVLKIGELMEHLEHVKKEGPNPAWLNKLMFAIEEKQRSDLARDLHDSV
LQDMISLKHQSEMFLADFEKDKVCTNQIRQRLINMNEQMSTVIQTTRETCQELRPQLLYDLGLVKALSKLAAQHQESSSI
DKIRLNTERFSKVLDLDTQLNLYRIVQELLSNAVKHSKANEVLIMLVCIKEKVVLHYEDDGIGFDPDKLYQNSASMGLSG
IRERVRALNGSLDIQTAEGKGFRVAIEMEL

Nucleotide


Download         Length: 1533 bp        

>NTDB_id=838183 QN340_RS20975 WP_228119635.1 4146510..4148042(-) (comP) [Bacillus paralicheniformis strain DY4]
ATTAAATTCAAGTATTCTCAACAGTCCTACTTATTGAAAATATTAATGTTGATGAACTTCATTGCATTGGTACCTTTTTT
GTTTTTCTATGTACTTCCTATGCTGGTCTTTGGCGATTATATTTTCTCGGCCATTGTTGTGTCCCCGTTTCTGTTGCTGA
TTCCTTTATCTTTGGTATATCAATTTATGTCTAATAAAATATATGATATTGAATTTTTAATTGGTCGATTGAAATATTAT
AGTTTTTTAGCGATAATTCCAACTTCTTTAATTATTACTATTTTAGCCATTGTTAAGCATCAAGAAGGAGAATTTTTCAC
AGTACAGGTTACAATCTTTACATATCTTATCATGGTAGGCGTTTTCTATTTAAAAGAAATTATTGATTTTCGCTTTCGGC
TAAAGCGCTTTTCAGAAAAATTTAACTACCAGGATAGTATTTTTAAATTTACTCAAACCATTCGAACATTTACGTCTTTA
AATCAAGTTTTAATGGAGTTAAAACAAATCGTTTTGGACGTGCTTCTTGTTAATAATATTTATATGCTCAAAGTAAAAAA
CGATGGATCGGTATCGATGCTAGAGAATGATGCAGAAGAAAAACCGTGGATCCCGTACGAACAAGAAGTAACCAAGGTCA
TCACCGACATCGGCAAAATCGTCGAAGTCGACCGCGGATTTTTGATTAAGATCGGTGAACGGGGCGGGACTTCTTATGTC
ATGCTGTGTTTGTCGGTTTTAAATACGCCTAGGCTGACGCGCGATGAGATTTCGTGGCTTGAGACGCTGGCGTTTTATAC
GAGTGTTTCCCTGGAAAACGTCTTGAAAATCGGCGAGCTGATGGAGCATCTGGAACATGTGAAAAAAGAAGGGCCGAATC
CGGCGTGGCTGAATAAATTGATGTTTGCGATTGAAGAGAAGCAGAGATCTGATTTGGCCCGTGATCTTCATGATTCTGTG
CTGCAGGACATGATTTCCTTGAAGCATCAAAGCGAGATGTTTCTGGCTGATTTTGAAAAAGATAAAGTCTGTACGAATCA
AATCAGGCAAAGGCTCATCAATATGAATGAGCAAATGTCCACCGTCATCCAGACGACAAGGGAAACGTGTCAGGAGCTGA
GGCCGCAGCTGTTGTACGATCTCGGACTGGTCAAAGCCCTTTCGAAACTGGCGGCACAGCATCAGGAGTCCTCATCGATC
GATAAGATCCGCCTCAATACGGAAAGGTTCTCAAAGGTGCTCGACCTGGACACGCAGCTGAATTTGTACAGAATTGTGCA
GGAGCTTTTAAGCAATGCGGTTAAACACTCGAAAGCTAATGAGGTTTTGATTATGCTTGTCTGCATAAAAGAAAAAGTTG
TTCTTCATTATGAAGATGACGGCATCGGTTTTGATCCGGACAAGCTTTATCAAAACAGCGCAAGCATGGGGCTGTCGGGT
ATTCGCGAGCGAGTCCGCGCGCTGAACGGCAGTCTGGATATACAGACAGCAGAAGGGAAAGGCTTCAGGGTCGCCATTGA
AATGGAATTGTAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(421-508)

Histidine kinase (HisKA_3)

(309-378)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

61.373

100

0.614