Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   QNH15_RS11455 Genome accession   NZ_CP126109
Coordinates   2148073..2149314 (+) Length   413 a.a.
NCBI ID   WP_283894753.1    Uniprot ID   -
Organism   Fictibacillus enclensis strain TL11     
Function   unknown (predicted from homology)   
Unclear

Genomic Context

Location: 2143073..2154314
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH15_RS11425 (QNH15_11425) - 2143133..2144422 (+) 1290 WP_283895535.1 pitrilysin family protein -
  QNH15_RS11430 (QNH15_11430) - 2144484..2145212 (+) 729 WP_283894749.1 SDR family oxidoreductase -
  QNH15_RS11435 (QNH15_11435) - 2145292..2145543 (+) 252 WP_283894750.1 DUF3243 domain-containing protein -
  QNH15_RS11440 (QNH15_11440) - 2145668..2146441 (+) 774 WP_283894751.1 DUF3388 domain-containing protein -
  QNH15_RS11445 (QNH15_11445) - 2146467..2147360 (+) 894 WP_283894752.1 helix-turn-helix domain-containing protein -
  QNH15_RS11450 (QNH15_11450) pgsA 2147408..2147986 (+) 579 WP_129475933.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  QNH15_RS11455 (QNH15_11455) cinA 2148073..2149314 (+) 1242 WP_283894753.1 competence/damage-inducible protein A Machinery gene
  QNH15_RS11460 (QNH15_11460) recA 2149438..2150490 (+) 1053 WP_283894754.1 recombinase RecA Machinery gene
  QNH15_RS11465 (QNH15_11465) rny 2150800..2152368 (+) 1569 WP_283894755.1 ribonuclease Y -
  QNH15_RS11470 (QNH15_11470) - 2152429..2153223 (+) 795 WP_283894756.1 TIGR00282 family metallophosphoesterase -
  QNH15_RS11475 (QNH15_11475) spoVS 2153358..2153618 (+) 261 WP_010193268.1 stage V sporulation protein SpoVS -

Sequence

Protein


Download         Length: 413 a.a.        Molecular weight: 44527.70 Da        Isoelectric Point: 4.9843

>NTDB_id=836395 QNH15_RS11455 WP_283894753.1 2148073..2149314(+) (cinA) [Fictibacillus enclensis strain TL11]
MNAEIIAVGSELLLGQIANTNAQFISSELAEAGINVFYHSVVGDNPGRLETVIQNAQTRSNLIIFTGGLGPTKDDLTKET
IAAVLGKQLVYDEEAMEGIELYYKRTGRTMTENNRKQALVLEGADVLSNKNGMAPGMALEAGGITYMLLPGPPKEMRPMF
GNFGITYLTAKLPGVEPIVSRVLRFFGIGESLLEATLQDIIDEQTNPTVAPLAGSHEVTLRLSAKFKDIHMAHIQLDLLE
ERINERVGEFLYGYGETSLTETTAEYLKSSKLTVSSAESLTGGWFGQQMTELPGSSAFYKGSVVCYSNEMKEKLLDVSPD
VLASHGAVSPDTAKQMADNVRKLTGSDIGISFTGVAGPDKSEGKEPGTVFIGLSDKNGTEVFSLSLSGSRASIRERSVKH
GLFFLLTKVKKGQ

Nucleotide


Download         Length: 1242 bp        

>NTDB_id=836395 QNH15_RS11455 WP_283894753.1 2148073..2149314(+) (cinA) [Fictibacillus enclensis strain TL11]
ATGAATGCAGAAATTATTGCTGTCGGAAGCGAGCTTCTTTTAGGACAGATCGCAAACACCAATGCCCAATTTATTTCATC
GGAACTGGCTGAGGCCGGAATCAATGTTTTTTACCATTCCGTAGTGGGTGATAATCCGGGACGTTTGGAAACGGTCATCC
AGAACGCTCAGACGAGGTCCAATCTGATCATTTTCACCGGCGGTCTCGGACCGACAAAAGATGATTTAACCAAAGAAACC
ATTGCCGCGGTTTTGGGAAAACAACTGGTGTATGATGAGGAAGCAATGGAAGGAATCGAGCTCTATTACAAGAGAACAGG
AAGAACGATGACCGAAAATAACAGAAAACAGGCGCTTGTGCTTGAAGGGGCAGATGTGCTGTCCAACAAAAACGGAATGG
CGCCGGGCATGGCCCTTGAAGCGGGTGGAATAACGTATATGCTTCTTCCGGGACCGCCAAAGGAAATGCGCCCGATGTTC
GGGAATTTCGGTATCACCTATCTCACCGCCAAGCTTCCCGGCGTGGAACCGATCGTATCGAGAGTCCTTCGTTTTTTTGG
CATTGGTGAGTCGCTCCTAGAAGCCACACTGCAGGACATTATCGATGAGCAGACCAACCCGACCGTAGCGCCGCTCGCCG
GCAGTCATGAAGTCACCCTGAGACTGTCTGCCAAATTCAAAGATATACATATGGCACACATTCAGCTGGACCTGCTTGAA
GAACGCATTAACGAGCGGGTTGGTGAATTTTTGTACGGATATGGTGAAACAAGTCTGACAGAAACAACAGCAGAATATTT
AAAAAGCAGCAAACTGACCGTTTCTTCTGCCGAGAGCCTTACTGGCGGTTGGTTCGGGCAGCAGATGACCGAGCTGCCCG
GCAGTTCAGCATTCTACAAAGGTTCTGTGGTTTGCTACAGCAATGAGATGAAAGAAAAGCTGCTCGATGTCAGCCCGGAC
GTTCTCGCATCCCATGGAGCTGTAAGTCCTGACACGGCTAAACAAATGGCGGACAACGTCCGAAAACTGACTGGTTCGGA
TATCGGCATCAGTTTTACCGGGGTGGCAGGACCGGATAAAAGTGAAGGCAAGGAGCCGGGAACCGTTTTTATCGGTTTGT
CGGACAAGAACGGAACAGAGGTATTTTCGCTCAGCCTCTCCGGGTCACGGGCAAGCATAAGAGAGCGGTCGGTAAAGCAC
GGATTGTTCTTTTTGTTGACAAAGGTCAAAAAAGGTCAATAA

Domains

Predicted by InterproScan.

Probable molybdopterin binding domain (MoCF_biosynth)

(5-165)

Competence-damaged protein (CinA)

(257-407)

Damage-inducible protein CinA KH domain (CinA_KH)

(180-253)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

59.406

97.821

0.581
  cinA Streptococcus mitis NCTC 12261

48.804

100

0.494
  cinA Streptococcus mitis SK321

48.325

100

0.489
  cinA Streptococcus pneumoniae Rx1

48.086

100

0.487
  cinA Streptococcus pneumoniae R6

48.086

100

0.487
  cinA Streptococcus pneumoniae TIGR4

48.544

99.758

0.484
  cinA Streptococcus pneumoniae D39

47.816

99.758

0.477
  cinA Streptococcus mutans UA159

46.192

98.547

0.455
  cinA Streptococcus suis isolate S10

37.561

99.274

0.373