Detailed information NTG0803883

Bioinformatically predicted

Overview

• Name: comGC
• Type: Machinery gene
• Locus tag: P3U54_RS06820
• Genome accession: NZ_CP120155
• Coordinates: 1367032..1367349 (+)
• Length: 105 a.a.
• NCBI ID: WP_064211051.1
• Uniprot ID: -
• Organism: Mammaliicoccus lentus strain Dog026
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1362032..1372349

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P3U54_RS06780 (P3U54_06780)	-	1362148..1362339 (+)	192	WP_017000229.1	YqgQ family protein	-
P3U54_RS06785 (P3U54_06785)	-	1362336..1363307 (+)	972	WP_017000230.1	ROK family glucokinase	-
P3U54_RS06790 (P3U54_06790)	-	1363307..1363621 (+)	315	WP_017000231.1	MTH1187 family thiamine-binding protein	-
P3U54_RS06795 (P3U54_06795)	-	1363650..1363889 (-)	240	WP_323711067.1	DUF2759 domain-containing protein	-
P3U54_RS06800 (P3U54_06800)	-	1363987..1364619 (+)	633	WP_323711068.1	MBL fold metallo-hydrolase	-
P3U54_RS06805 (P3U54_06805)	-	1364684..1364932 (-)	249	WP_017000234.1	DUF2626 family protein	-
P3U54_RS06810 (P3U54_06810)	comGA	1365085..1365981 (+)	897	WP_239706323.1	competence type IV pilus ATPase ComGA	Machinery gene
P3U54_RS06815 (P3U54_06815)	comGB	1365978..1367018 (+)	1041	WP_323711069.1	competence type IV pilus assembly protein ComGB	-
P3U54_RS06820 (P3U54_06820)	comGC	1367032..1367349 (+)	318	WP_064211051.1	competence type IV pilus major pilin ComGC	Machinery gene
P3U54_RS06825 (P3U54_06825)	comGD	1367349..1367777 (+)	429	WP_323711070.1	competence type IV pilus minor pilin ComGD	-
P3U54_RS06830 (P3U54_06830)	comGE	1367764..1368036 (+)	273	WP_228082628.1	competence type IV pilus minor pilin ComGE	-
P3U54_RS06835 (P3U54_06835)	comGF	1368050..1368445 (+)	396	WP_237687866.1	competence type IV pilus minor pilin ComGF	-
P3U54_RS06840 (P3U54_06840)	-	1368681..1369199 (+)	519	WP_064205405.1	shikimate kinase	-
P3U54_RS06845 (P3U54_06845)	gcvT	1369362..1370450 (+)	1089	WP_323711071.1	glycine cleavage system aminomethyltransferase GcvT	-
P3U54_RS06850 (P3U54_06850)	gcvPA	1370462..1371805 (+)	1344	WP_064205406.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	-

Sequence

Protein

• Length: 105 a.a.
• Molecular weight: 11556.64 Da
• Isoelectric Point: 7.8266

>NTDB_id=803883 P3U54_RS06820 WP_064211051.1 1367032..1367349(+) (comGC) [Mammaliicoccus lentus strain Dog026]
MKNIKFLKKEEGFTLIEMLIVLLIISILLIIIIPNISKQSETVKSTGCQAQVKMVAGQVEAYTLKHDAKPNSINDLVSDG
FIKENQLTCKSGQNIVLNNGEVVAQ

Nucleotide

• Length: 318 bp

>NTDB_id=803883 P3U54_RS06820 WP_064211051.1 1367032..1367349(+) (comGC) [Mammaliicoccus lentus strain Dog026]
ATGAAAAATATAAAGTTTTTAAAAAAAGAAGAAGGCTTCACGTTGATTGAGATGTTAATCGTATTATTAATTATAAGTAT
TTTACTTATAATTATAATCCCTAACATAAGCAAGCAGTCTGAAACCGTGAAAAGTACTGGTTGTCAGGCACAAGTTAAAA
TGGTTGCTGGCCAAGTAGAAGCATATACATTAAAACACGATGCTAAGCCAAATTCAATTAATGATTTAGTAAGTGATGGG
TTCATAAAAGAGAATCAATTGACTTGTAAATCTGGTCAGAACATTGTTTTAAATAACGGAGAAGTAGTAGCTCAATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (8-32)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC	Staphylococcus aureus MW2	67.327	96.19	0.648
comGC	Staphylococcus aureus N315	67.327	96.19	0.648
comGC/cglC	Streptococcus mitis NCTC 12261	41.905	100	0.419
comGC	Bacillus subtilis subsp. subtilis str. 168	46.237	88.571	0.41
comGC/cglC	Streptococcus mitis SK321	44.33	92.381	0.41
comYC	Streptococcus mutans UA159	49.425	82.857	0.41
comYC	Streptococcus mutans UA140	49.425	82.857	0.41
comGC/cglC	Streptococcus pneumoniae D39	45.977	82.857	0.381
comGC/cglC	Streptococcus pneumoniae TIGR4	45.977	82.857	0.381
comGC/cglC	Streptococcus pneumoniae R6	45.977	82.857	0.381
comGC/cglC	Streptococcus pneumoniae Rx1	45.977	82.857	0.381
comGC	Lactococcus lactis subsp. cremoris KW2	46.341	78.095	0.362