Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   KH172YL63_RS06730 Genome accession   NZ_AP022842
Coordinates   1349374..1349841 (-) Length   155 a.a.
NCBI ID   WP_173105382.1    Uniprot ID   A0A6F8TR71
Organism   Bacillus sp. KH172YL63     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1344374..1354841
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KH172YL63_RS06700 (KH172YL63_12870) - 1345121..1345708 (-) 588 WP_173105376.1 HD domain-containing protein -
  KH172YL63_RS06705 (KH172YL63_12880) queC 1346079..1346741 (+) 663 WP_173105377.1 7-cyano-7-deazaguanine synthase QueC -
  KH172YL63_RS06710 (KH172YL63_12890) queD 1346738..1347169 (+) 432 WP_173105378.1 6-carboxytetrahydropterin synthase QueD -
  KH172YL63_RS06715 (KH172YL63_12900) queE 1347166..1347891 (+) 726 WP_173105379.1 7-carboxy-7-deazaguanine synthase QueE -
  KH172YL63_RS06720 (KH172YL63_12910) - 1347910..1348095 (-) 186 WP_173105380.1 hypothetical protein -
  KH172YL63_RS06725 (KH172YL63_12920) - 1348256..1349176 (+) 921 WP_173105381.1 chemotaxis protein -
  KH172YL63_RS06730 (KH172YL63_12930) kre 1349374..1349841 (-) 468 WP_173105382.1 YkyB family protein Regulator
  KH172YL63_RS06735 - 1350051..1350281 (-) 231 Protein_1276 hypothetical protein -
  KH172YL63_RS06740 (KH172YL63_12940) - 1350490..1352583 (+) 2094 WP_173105383.1 EAL domain-containing protein -
  KH172YL63_RS06745 (KH172YL63_12950) - 1352743..1352961 (+) 219 WP_173105384.1 hypothetical protein -
  KH172YL63_RS06750 (KH172YL63_12960) fadH 1353091..1353858 (+) 768 WP_173105385.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 155 a.a.        Molecular weight: 17670.30 Da        Isoelectric Point: 10.7358

>NTDB_id=79336 KH172YL63_RS06730 WP_173105382.1 1349374..1349841(-) (kre) [Bacillus sp. KH172YL63]
MRNTSKSTPISTSVNTLSQAIFTVNRHAKTAGNPKYLYTLKKRALVKMIQEGKARKVGLHFSNNPKFSQQQSDVLIDCGD
YTFHLPPSKEDFKALPHLGSLDQRSRNPKCKMPLQQAKGILEQYTGLSDRNDRTRKPEKPQYQKPVFKKLGDSFF

Nucleotide


Download         Length: 468 bp        

>NTDB_id=79336 KH172YL63_RS06730 WP_173105382.1 1349374..1349841(-) (kre) [Bacillus sp. KH172YL63]
TTGAGAAACACTAGTAAATCCACCCCTATCTCCACATCCGTAAATACCCTCTCTCAAGCTATTTTCACTGTAAACAGACA
TGCGAAAACGGCAGGAAACCCAAAATACTTATATACATTAAAAAAGCGGGCACTTGTGAAAATGATCCAGGAAGGCAAGG
CCAGGAAAGTGGGACTGCACTTTTCCAACAACCCTAAATTCAGCCAGCAGCAATCCGACGTATTAATCGATTGCGGAGAT
TACACTTTTCATCTCCCACCCTCCAAAGAGGATTTTAAAGCGCTGCCTCACCTGGGTTCTCTCGATCAGCGATCAAGAAA
CCCAAAATGCAAAATGCCCCTTCAACAGGCCAAAGGAATCCTGGAACAATACACCGGTTTGTCTGACCGAAATGACCGGA
CCCGGAAACCGGAAAAGCCCCAATACCAAAAACCAGTCTTCAAAAAATTGGGAGACAGCTTCTTTTGA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6F8TR71

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

57.419

100

0.574

Multiple sequence alignment