Detailed information NTG0787667

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: PT258_RS13690
• Genome accession: NZ_CP117814
• Coordinates: 3067199..3068284 (+)
• Length: 361 a.a.
• NCBI ID: WP_061784459.1
• Uniprot ID: -
• Organism: Legionella pneumophila strain D5241
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 3062199..3073284

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PT258_RS13665 (PT258_13665)	-	3062592..3063341 (-)	750	WP_014842652.1	CPBP family glutamic-type intramembrane protease	-
PT258_RS13670 (PT258_13670)	rsmB	3063338..3064621 (-)	1284	WP_061784457.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
PT258_RS13675 (PT258_13675)	fmt	3064618..3065562 (-)	945	WP_061784458.1	methionyl-tRNA formyltransferase	-
PT258_RS13680 (PT258_13680)	def	3065559..3066071 (-)	513	WP_010948295.1	peptide deformylase	-
PT258_RS13685 (PT258_13685)	-	3066165..3067202 (+)	1038	WP_014842655.1	LysM domain-containing protein	-
PT258_RS13690 (PT258_13690)	dprA	3067199..3068284 (+)	1086	WP_061784459.1	DNA-processing protein DprA	Machinery gene
PT258_RS13695 (PT258_13695)	-	3068274..3068711 (+)	438	WP_011947522.1	DUF494 family protein	-
PT258_RS13700 (PT258_13700)	topA	3068791..3071070 (+)	2280	WP_061784460.1	type I DNA topoisomerase	-
PT258_RS13705 (PT258_13705)	-	3071281..3073254 (-)	1974	WP_061784461.1	acyltransferase family protein	-

Sequence

Protein

• Length: 361 a.a.
• Molecular weight: 39497.68 Da
• Isoelectric Point: 7.5077

>NTDB_id=787667 PT258_RS13690 WP_061784459.1 3067199..3068284(+) (dprA) [Legionella pneumophila strain D5241]
MNNLQPLLALNRMKRIGPRTVLKLQKRWPDLNLMFQLSSVALEEAGLPSWLAQTIKNFDPDFIKTDLNWLSSSENHHILT
WDSPYYPALLKEIADPPFILYAKGELSALTQPSLAIVGSRNASVTGNENARAFSREISRHGVSIVSGLALGIDAHAHLGC
LEGGGKTIAVLGTGIDCIYPRRHLKLAEQITENGLLLSEFPLKSPPIAGHFPLRNRIISGLSLCILVIEAAIKSGSLITA
RMALEQNRDVLAIPGSIHNPLARGCHYLLQQGAKLVTSVADVLDELKIEHHQFTSNKPIFSLASGKENLVKFIGFETTTI
DQIIDRSGYGMEQVTSGLAELELKGAVIAVPGGYIRCEYER

Nucleotide

• Length: 1086 bp

>NTDB_id=787667 PT258_RS13690 WP_061784459.1 3067199..3068284(+) (dprA) [Legionella pneumophila strain D5241]
ATGAATAATCTGCAACCCCTCCTCGCCTTAAACAGGATGAAAAGAATTGGTCCCCGAACCGTATTAAAACTGCAAAAAAG
ATGGCCTGATTTAAACCTTATGTTCCAACTGTCCAGTGTTGCTCTGGAAGAAGCGGGCTTGCCATCCTGGTTGGCACAAA
CCATAAAAAATTTTGATCCGGACTTTATAAAAACTGATTTGAACTGGCTAAGTTCATCAGAAAATCATCATATTTTAACT
TGGGACTCCCCCTATTATCCCGCATTGCTCAAAGAAATAGCCGATCCTCCCTTCATTTTATACGCTAAAGGTGAGCTGTC
CGCCTTGACACAACCCAGCCTGGCTATTGTTGGAAGTCGCAATGCTTCTGTAACAGGAAACGAGAATGCCCGAGCGTTCT
CCAGGGAGATTTCCAGACATGGGGTAAGCATAGTGAGTGGTTTAGCCTTGGGAATTGATGCTCATGCTCATTTAGGCTGT
CTGGAAGGTGGCGGCAAAACGATAGCCGTCTTAGGTACCGGAATTGATTGTATCTATCCGCGCCGGCATTTAAAATTAGC
TGAGCAAATTACAGAGAATGGTTTATTATTAAGCGAATTTCCTTTAAAAAGTCCACCAATTGCTGGACATTTTCCACTCA
GAAATCGTATAATAAGCGGTCTATCATTATGCATTTTGGTTATCGAGGCAGCAATTAAAAGCGGTTCTTTAATTACAGCA
AGAATGGCTCTGGAACAAAACAGAGATGTATTGGCTATTCCCGGATCGATTCATAACCCGTTAGCCAGGGGCTGCCACTA
CTTATTGCAGCAGGGTGCGAAATTAGTAACTTCAGTGGCTGATGTTCTTGATGAGCTAAAAATTGAGCACCATCAGTTCA
CTTCTAATAAACCAATTTTTTCCCTTGCCAGCGGTAAGGAAAACCTAGTAAAGTTCATTGGTTTTGAAACTACGACTATC
GATCAAATCATTGATCGTAGCGGATATGGCATGGAACAAGTCACGAGTGGACTGGCTGAACTAGAATTGAAAGGGGCTGT
GATAGCAGTGCCCGGTGGCTATATAAGGTGTGAATATGAAAGATAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (74-277)

• DprA winged helix domain (DprA_WH) (300-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Legionella pneumophila strain ERS1305867	99.723	100	0.997
dprA	Vibrio cholerae strain A1552	42.895	100	0.443
dprA	Vibrio campbellii strain DS40M4	46.505	91.136	0.424
dprA	Glaesserella parasuis strain SC1401	39.683	100	0.416