Detailed information NTG0780710

Bioinformatically predicted

Overview

• Name: uvrB
• Type: Machinery gene
• Locus tag: QY067_RS21660
• Genome accession: NZ_CP129685
• Coordinates: 4518635..4520647 (-)
• Length: 670 a.a.
• NCBI ID: WP_003091426.1
• Uniprot ID: -
• Organism: Pseudomonas aeruginosa strain PA2500
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 4513635..4525647

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QY067_RS21645	-	4515025..4515945 (-)	921	WP_003091419.1	LysR family transcriptional regulator	-
QY067_RS21650	-	4516048..4517082 (+)	1035	WP_003091421.1	HlyD family secretion protein	-
QY067_RS21655	-	4517132..4518631 (+)	1500	WP_073660307.1	MDR family MFS transporter	-
QY067_RS21660	uvrB	4518635..4520647 (-)	2013	WP_003091426.1	excinuclease ABC subunit UvrB	Machinery gene
QY067_RS21665	-	4520835..4522031 (+)	1197	WP_003091428.1	amino acid aminotransferase	-
QY067_RS21675	comEA/comE1	4522248..4522577 (-)	330	WP_003091430.1	ComEA family DNA-binding protein	Machinery gene
QY067_RS21680	-	4522768..4524765 (-)	1998	WP_021265047.1	nucleoside-diphosphate sugar epimerase/dehydratase	-

Sequence

Protein

• Length: 670 a.a.
• Molecular weight: 76052.35 Da
• Isoelectric Point: 5.2050

>NTDB_id=780710 QY067_RS21660 WP_003091426.1 4518635..4520647(-) (uvrB) [Pseudomonas aeruginosa strain PA2500]
MDTFQLDSRFKPAGDQPEAIRQMVEGLEAGLSHQTLLGVTGSGKTFSIANVIAQVQRPTLVLAPNKTLAAQLYGEFKTFF
PHNSVEYFVSYYDYYQPEAYVPSSDTYIEKDSSINDHIEQMRLSATKALLERPDAIIVATVSSIYGLGDPASYLKMVLHL
DRGDRIDQRELLRRLTSLQYTRNDMDFARATFRVRGDVIDIFPAESDLEAIRVELFDDEVESLSAFDPLTGEVIRKLPRF
TFYPKSHYVTPRETLLEAVDQIKAELKERLDYLRNSNKLVEAQRLEQRTRFDLEMILELGYCNGIENYSRYLSGRAPGEP
PPTLYDYLPANSLLVIDESHVSVPQVGAMFKGDRSRKETLVEYGFRLPSALDNRPLRFEEWEAVSPQTIFVSATPGPYEA
EHAGRIIEQVVRPTGLVDPEIEVRPAMTQVDDLLSQIRQRVAKNERVLVTTLTKRMAEDLTDYLGDHDVRVRYLHSDIDT
VERVEIIRDLRAGAFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARNLHGKAILYADNVTGSMQ
RAIDETERRRAKQIAFNQAHGIVPKGVRKDIKDILEGAVVPGARGKRKGVAKVAEESGRYENELRSPSEISKRIRQLEEK
MYQLARDLEFEAAAQLRDEIQTLRERLVNV

Nucleotide

• Length: 2013 bp

>NTDB_id=780710 QY067_RS21660 WP_003091426.1 4518635..4520647(-) (uvrB) [Pseudomonas aeruginosa strain PA2500]
ATGGATACGTTCCAACTCGACTCGCGCTTCAAGCCCGCCGGCGACCAGCCGGAAGCCATCCGGCAGATGGTCGAGGGGCT
GGAGGCGGGGCTTTCGCACCAGACCCTGCTGGGGGTGACGGGCTCTGGCAAGACTTTCAGCATCGCCAACGTGATTGCCC
AGGTGCAGCGCCCGACCCTGGTCCTGGCGCCAAACAAGACCCTGGCGGCCCAGCTCTACGGGGAGTTCAAGACGTTCTTC
CCGCACAATTCCGTGGAGTACTTCGTTTCCTACTACGACTACTACCAGCCGGAGGCCTACGTACCGTCTTCCGATACCTA
TATCGAGAAGGACTCCTCGATCAACGACCATATCGAGCAGATGCGCCTGTCGGCGACCAAGGCGCTGCTCGAGCGTCCGG
ATGCGATCATCGTCGCCACCGTGTCGTCCATCTACGGCCTCGGTGATCCCGCGTCCTACCTGAAGATGGTCCTGCACCTG
GACCGCGGCGACCGCATCGACCAGCGCGAACTGTTACGGCGACTGACCAGCCTGCAGTACACCCGCAACGACATGGATTT
CGCCCGTGCGACTTTCCGTGTGCGTGGCGATGTGATCGACATCTTCCCGGCCGAATCCGATCTCGAGGCGATTCGTGTCG
AGTTGTTCGACGACGAGGTGGAAAGCCTCTCGGCCTTCGATCCGCTCACCGGCGAGGTGATCCGCAAGCTGCCGCGCTTC
ACCTTCTACCCCAAGAGCCACTACGTGACTCCGCGCGAGACGCTGCTGGAGGCGGTCGACCAGATCAAGGCCGAACTCAA
GGAACGCCTGGACTACCTGCGCAACAGCAACAAGCTGGTGGAAGCGCAGCGCCTGGAGCAGCGCACCCGTTTCGACCTGG
AGATGATCCTCGAACTGGGCTACTGCAACGGCATCGAGAACTACTCGCGCTATCTTTCCGGGCGGGCCCCCGGCGAGCCG
CCGCCGACGCTCTACGACTACCTGCCGGCCAACTCGCTGCTGGTTATCGACGAATCGCACGTCAGCGTTCCGCAGGTCGG
TGCGATGTTCAAGGGCGACCGCTCGCGCAAGGAGACCCTGGTGGAATACGGTTTCCGCCTGCCTTCGGCGCTGGACAACC
GGCCGCTGCGCTTCGAAGAGTGGGAGGCGGTGAGTCCGCAGACCATCTTCGTCTCCGCCACCCCGGGCCCCTACGAGGCG
GAACATGCCGGGCGGATCATCGAGCAGGTGGTGCGTCCCACCGGGCTGGTCGATCCGGAGATCGAGGTACGCCCGGCGAT
GACCCAGGTGGATGACCTGCTCTCGCAGATCCGCCAGCGGGTGGCCAAGAACGAGCGGGTGCTGGTGACTACCCTGACCA
AGCGCATGGCCGAAGACCTCACCGATTATCTCGGCGATCACGACGTGCGGGTGCGCTACCTGCACTCGGACATCGATACC
GTCGAGCGAGTGGAGATCATCCGCGACCTGCGCGCCGGTGCGTTCGACGTGCTGGTGGGGATCAACCTGCTGCGCGAAGG
CCTGGACATGCCCGAGGTGTCGCTGGTGGCGATCCTCGACGCGGACAAGGAAGGCTTCCTGCGCTCGGAGCGCTCGCTGA
TCCAGACCATCGGTCGTGCCGCGCGCAACCTGCACGGCAAGGCGATCCTCTACGCCGACAACGTCACCGGCTCGATGCAG
CGTGCGATCGACGAGACCGAGCGGCGTCGGGCCAAGCAGATCGCGTTCAACCAAGCCCATGGCATCGTGCCCAAGGGGGT
GCGCAAGGATATCAAGGACATTCTCGAAGGCGCCGTGGTGCCCGGCGCGCGCGGCAAGCGCAAGGGCGTGGCCAAGGTGG
CGGAGGAGAGCGGGCGCTACGAGAACGAACTGCGCTCGCCGAGCGAGATCAGCAAGCGCATCCGCCAACTGGAGGAAAAG
ATGTACCAGTTGGCCCGCGACCTGGAGTTCGAGGCGGCGGCGCAACTGCGCGACGAGATCCAGACGCTGCGCGAGCGCCT
GGTCAACGTCTGA

Domains

Predicted by InterProScan.

• Type III restriction enzyme, res subunit (ResIII) (11-118)

• Helicase conserved C-terminal domain (Helicase_C) (435-542)

• UvrB/uvrC motif (UVR) (632-665)

• UvrB interaction domain (UvrB_inter) (158-248)

• Ultra-violet resistance protein B (UvrB) (550-592)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrB	Streptococcus pneumoniae R6	57.686	98.06	0.566
uvrB	Streptococcus pneumoniae TIGR4	57.686	98.06	0.566
uvrB	Streptococcus pneumoniae D39	57.686	98.06	0.566