Detailed information NTG0780350

Bioinformatically predicted

Overview

• Name: comGC
• Type: Machinery gene
• Locus tag: PN942_RS02715
• Genome accession: NZ_CP116807
• Coordinates: 545587..545904 (-)
• Length: 105 a.a.
• NCBI ID: WP_070045385.1
• Uniprot ID: A0AAX3W128
• Organism: Mammaliicoccus lentus strain PVZ.22
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 540587..550904

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PN942_RS02685 (PN942_02680)	gcvT	541153..542241 (-)	1089	WP_017000244.1	glycine cleavage system aminomethyltransferase GcvT	-
PN942_RS02690 (PN942_02685)	-	542404..542922 (-)	519	WP_017000243.1	shikimate kinase	-
PN942_RS02695 (PN942_02690)	-	543188..544360 (-)	1173	WP_000195429.1	IS256-like element IS256 family transposase	-
PN942_RS02700 (PN942_02695)	comGF	544578..544925 (-)	348	WP_282461086.1	competence type IV pilus minor pilin ComGF	-
PN942_RS02705 (PN942_02700)	comGE	544900..545172 (-)	273	WP_228082628.1	competence type IV pilus minor pilin ComGE	-
PN942_RS02710 (PN942_02705)	comGD	545159..545587 (-)	429	WP_017000239.1	competence type IV pilus minor pilin ComGD	-
PN942_RS02715 (PN942_02710)	comGC	545587..545904 (-)	318	WP_070045385.1	competence type IV pilus major pilin ComGC	Machinery gene
PN942_RS02720 (PN942_02715)	comGB	545931..546956 (-)	1026	WP_282461087.1	competence type IV pilus assembly protein ComGB	-
PN942_RS02725 (PN942_02720)	comGA	546956..547852 (-)	897	WP_017000235.1	competence type IV pilus ATPase ComGA	Machinery gene
PN942_RS02730 (PN942_02725)	-	548005..548253 (+)	249	WP_017000234.1	DUF2626 family protein	-
PN942_RS02735 (PN942_02730)	-	548318..548950 (-)	633	WP_017000233.1	MBL fold metallo-hydrolase	-
PN942_RS02740 (PN942_02735)	-	549048..549287 (+)	240	WP_017000232.1	DUF2759 domain-containing protein	-
PN942_RS02745 (PN942_02740)	-	549316..549630 (-)	315	WP_282461088.1	MTH1187 family thiamine-binding protein	-
PN942_RS02750 (PN942_02745)	-	549630..550601 (-)	972	WP_017000230.1	ROK family glucokinase	-
PN942_RS02755 (PN942_02750)	-	550598..550789 (-)	192	WP_017000229.1	YqgQ family protein	-

Sequence

Protein

• Length: 105 a.a.
• Molecular weight: 11590.66 Da
• Isoelectric Point: 7.8266

>NTDB_id=780350 PN942_RS02715 WP_070045385.1 545587..545904(-) (comGC) [Mammaliicoccus lentus strain PVZ.22]
MKNIKFFKKEEGFTLIEMLIVLLIISILLIIIIPNISKQSETVKSTGCQAQVKMVAGQVEAYTLKHDAKPNSINDLVSDG
FIKENQLTCKSGQNIVLNNGEVVAQ

Nucleotide

• Length: 318 bp

>NTDB_id=780350 PN942_RS02715 WP_070045385.1 545587..545904(-) (comGC) [Mammaliicoccus lentus strain PVZ.22]
ATGAAAAATATAAAGTTTTTTAAAAAAGAAGAAGGCTTCACGTTGATTGAGATGTTAATCGTATTATTAATTATAAGTAT
TTTACTTATAATTATAATCCCTAACATAAGCAAGCAGTCTGAAACCGTGAAAAGTACTGGTTGTCAGGCACAAGTTAAAA
TGGTTGCTGGCCAAGTAGAAGCATATACATTAAAACACGATGCTAAGCCAAATTCAATTAATGATTTAGTAAGTGATGGG
TTCATAAAAGAGAATCAATTGACTTGTAAATCTGGTCAGAACATTGTTTTAAATAACGGAGAAGTAGTAGCTCAATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (8-32)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC	Staphylococcus aureus MW2	66.337	96.19	0.638
comGC	Staphylococcus aureus N315	66.337	96.19	0.638
comGC	Bacillus subtilis subsp. subtilis str. 168	46.237	88.571	0.41
comGC/cglC	Streptococcus mitis NCTC 12261	40.952	100	0.41
comGC/cglC	Streptococcus mitis SK321	43.299	92.381	0.4
comGC/cglC	Streptococcus pneumoniae R6	44.828	82.857	0.371
comGC/cglC	Streptococcus pneumoniae TIGR4	44.828	82.857	0.371
comGC/cglC	Streptococcus pneumoniae Rx1	44.828	82.857	0.371
comGC/cglC	Streptococcus pneumoniae D39	44.828	82.857	0.371
comYC	Streptococcus mutans UA159	50.649	73.333	0.371
comYC	Streptococcus mutans UA140	50.649	73.333	0.371
comGC	Lactococcus lactis subsp. cremoris KW2	46.341	78.095	0.362