Detailed information NTG0777672

Bioinformatically predicted

Overview

• Name: cinA
• Type: Machinery gene
• Locus tag: PML89_RS05145
• Genome accession: NZ_CP116503
• Coordinates: 1096658..1097911 (-)
• Length: 417 a.a.
• NCBI ID: WP_272157924.1
• Uniprot ID: -
• Organism: Vagococcus lutrae strain K136-2
• Function: facilitate localization of RecA (predicted from homology) Homologous recombination

Genomic Context

Location: 1091658..1102911

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PML89_RS05120 (PML89_05120)	-	1091803..1092003 (-)	201	WP_023605866.1	cold-shock protein	-
PML89_RS05125 (PML89_05125)	-	1092179..1092718 (-)	540	WP_023605865.1	HdeD family acid-resistance protein	-
PML89_RS05130 (PML89_05130)	-	1092741..1093604 (-)	864	WP_126762878.1	alpha/beta fold hydrolase	-
PML89_RS05135 (PML89_05135)	rny	1093756..1095315 (-)	1560	WP_126762880.1	ribonuclease Y	-
PML89_RS05140 (PML89_05140)	recA	1095535..1096572 (-)	1038	WP_023605862.1	recombinase RecA	Machinery gene
PML89_RS05145 (PML89_05145)	cinA	1096658..1097911 (-)	1254	WP_272157924.1	competence/damage-inducible protein A	Machinery gene
PML89_RS05150 (PML89_05150)	pgsA	1098051..1098629 (-)	579	WP_252999577.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
PML89_RS05155 (PML89_05155)	-	1098653..1099501 (-)	849	WP_252999578.1	helix-turn-helix domain-containing protein	-
PML89_RS05160 (PML89_05160)	ymfI	1099526..1100251 (-)	726	WP_252999579.1	elongation factor P 5-aminopentanone reductase	-
PML89_RS05165 (PML89_05165)	yfmH	1100254..1101555 (-)	1302	WP_248853054.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
PML89_RS05170 (PML89_05170)	yfmF	1101545..1102816 (-)	1272	WP_252999580.1	EF-P 5-aminopentanol modification-associated protein YfmF	-

Sequence

Protein

• Length: 417 a.a.
• Molecular weight: 45775.91 Da
• Isoelectric Point: 4.5363

>NTDB_id=777672 PML89_RS05145 WP_272157924.1 1096658..1097911(-) (cinA) [Vagococcus lutrae strain K136-2]
MRAEIIAVGTELLIGQVVNTNATFLSEELVGIGYDIYYHSVVGDNPERLKELIGQASQRSELIVLCGGLGPTEDDLTRDV
LADYLKEPMVLDPEGYDKIDTYMTRSGREMTENNRRQALTIQGGQAIPNDTGLAVGTFYQAETTSYLVLPGPPRELKPMF
YHHVIPLLKQQLPQTDQLYSRVLRFFGIGESQLVLELETLIHEQTNPTIAPYAGDTEVRLRLTVKATDETTASEMLDEME
EKIMSQVGDYFYGYGEENSLIKETVKALKAAKQTVASAESLTAGMFMSALGDVPGVSSVFNGGFVTYTNEMKSCLLKIDS
ALLAQHGAVSEACACAMAEQARVLTKSDYGVALTGVAGPDKSEGQPVGSVWIGLSSATSGTQAYHFQLQRDRQYIRQSAM
MRAMDLLRRQVIAENHD

Nucleotide

• Length: 1254 bp

>NTDB_id=777672 PML89_RS05145 WP_272157924.1 1096658..1097911(-) (cinA) [Vagococcus lutrae strain K136-2]
ATGCGAGCAGAAATTATCGCAGTGGGTACGGAGCTATTAATTGGTCAAGTGGTTAATACCAATGCGACTTTTTTATCAGA
AGAATTAGTGGGGATTGGTTATGATATTTATTATCACAGTGTGGTAGGGGATAACCCAGAGCGTTTAAAAGAGTTAATTG
GACAAGCCTCTCAGCGAAGTGAATTGATTGTATTGTGTGGGGGATTAGGACCAACAGAAGATGATTTAACGCGAGATGTG
TTAGCTGATTATTTAAAGGAGCCGATGGTGTTAGATCCAGAGGGTTACGATAAGATTGATACCTATATGACTCGCTCTGG
TCGCGAGATGACGGAAAATAATCGTAGGCAAGCGTTAACGATTCAAGGAGGTCAAGCGATACCGAATGATACAGGCTTGG
CAGTCGGGACTTTTTATCAAGCTGAGACGACGAGTTATTTAGTCTTACCAGGACCGCCGCGTGAGTTAAAACCAATGTTT
TATCATCATGTTATCCCATTGTTAAAGCAGCAGTTACCTCAAACCGACCAACTGTATTCTCGCGTATTACGCTTTTTTGG
TATCGGGGAGTCACAGTTAGTTTTAGAATTAGAAACATTAATTCACGAGCAAACCAATCCGACCATTGCGCCATACGCAG
GAGATACAGAAGTTCGTTTACGACTGACAGTCAAAGCAACAGATGAGACAACAGCAAGTGAGATGCTAGATGAGATGGAA
GAAAAAATTATGTCTCAAGTAGGGGATTACTTCTATGGTTATGGGGAAGAAAATAGTTTGATTAAAGAAACCGTCAAGGC
CTTAAAAGCCGCGAAGCAAACGGTCGCCTCGGCCGAAAGTTTGACTGCCGGAATGTTTATGAGTGCATTGGGAGACGTTC
CAGGTGTTTCTAGTGTCTTTAATGGTGGCTTTGTCACATATACGAATGAGATGAAAAGTTGCTTATTAAAGATTGATTCC
GCTTTGCTTGCTCAACACGGGGCTGTTAGTGAGGCGTGTGCGTGTGCGATGGCAGAACAGGCTCGTGTGTTAACAAAGAG
TGATTATGGCGTAGCGTTAACAGGCGTAGCAGGTCCAGATAAAAGTGAGGGTCAGCCTGTAGGAAGTGTGTGGATTGGGC
TTTCTTCCGCGACAAGTGGGACACAGGCTTATCATTTTCAACTTCAGCGAGACCGTCAATATATTCGGCAAAGTGCCATG
ATGCGTGCAATGGACTTACTACGTCGTCAAGTGATAGCAGAAAATCACGACTAA

Domains

Predicted by InterproScan.

• Probable molybdopterin binding domain (MoCF_biosynth) (5-169)

• Damage-inducible protein CinA KH domain (CinA_KH) (180-253)

• Competence-damaged protein (CinA) (259-410)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cinA	Streptococcus pneumoniae TIGR4	50.118	100	0.508
cinA	Streptococcus pneumoniae R6	49.645	100	0.504
cinA	Streptococcus pneumoniae Rx1	49.645	100	0.504
cinA	Streptococcus mitis NCTC 12261	49.409	100	0.501
cinA	Streptococcus mitis SK321	49.409	100	0.501
cinA	Streptococcus pneumoniae D39	49.409	100	0.501
cinA	Streptococcus mutans UA159	48.687	100	0.489
cinA	Bacillus subtilis subsp. subtilis str. 168	46.324	97.842	0.453
cinA	Streptococcus suis isolate S10	42.579	98.561	0.42