Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | OOT55_RS04195 | Genome accession | NZ_CP110629 |
| Coordinates | 987396..987662 (+) | Length | 88 a.a. |
| NCBI ID | WP_265367892.1 | Uniprot ID | - |
| Organism | Marinimicrobium sp. C6131 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 982396..992662
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OOT55_RS04180 (OOT55_04180) | cysD | 982861..983772 (+) | 912 | WP_265367890.1 | sulfate adenylyltransferase subunit CysD | - |
| OOT55_RS04185 (OOT55_04185) | cysN | 983775..985187 (+) | 1413 | WP_265367891.1 | sulfate adenylyltransferase subunit CysN | - |
| OOT55_RS04190 (OOT55_04190) | - | 985323..986588 (+) | 1266 | WP_265365638.1 | IS110 family transposase | - |
| OOT55_RS04195 (OOT55_04195) | comEA | 987396..987662 (+) | 267 | WP_265367892.1 | ComEA family DNA-binding protein | Machinery gene |
| OOT55_RS04200 (OOT55_04200) | pyrF | 987808..988515 (+) | 708 | WP_265367893.1 | orotidine-5'-phosphate decarboxylase | - |
| OOT55_RS04205 (OOT55_04205) | cmk | 988625..989278 (+) | 654 | WP_416140993.1 | (d)CMP kinase | - |
| OOT55_RS04210 (OOT55_04210) | - | 989350..990705 (+) | 1356 | WP_265367895.1 | phosphomannomutase CpsG | - |
| OOT55_RS04215 (OOT55_04215) | galU | 990827..991717 (+) | 891 | WP_265367896.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
Sequence
Protein
Download Length: 88 a.a. Molecular weight: 9419.70 Da Isoelectric Point: 3.9940
>NTDB_id=755441 OOT55_RS04195 WP_265367892.1 987396..987662(+) (comEA) [Marinimicrobium sp. C6131]
MKLISSFLCAITLLFSAVAFAAPSAPVNINTADIETLSELDGIGPKKAEAIVAWRDENGEFVSLDQLVEVQGIGEATIES
NRDHMTLN
MKLISSFLCAITLLFSAVAFAAPSAPVNINTADIETLSELDGIGPKKAEAIVAWRDENGEFVSLDQLVEVQGIGEATIES
NRDHMTLN
Nucleotide
Download Length: 267 bp
>NTDB_id=755441 OOT55_RS04195 WP_265367892.1 987396..987662(+) (comEA) [Marinimicrobium sp. C6131]
ATGAAACTGATCTCATCCTTCCTGTGTGCCATCACCCTGCTGTTCAGCGCCGTGGCTTTTGCAGCCCCGTCAGCCCCCGT
CAACATCAATACCGCTGATATTGAAACACTGTCAGAGCTCGACGGCATTGGTCCCAAAAAAGCCGAGGCCATTGTGGCCT
GGCGCGATGAGAACGGCGAGTTTGTCAGCCTGGATCAACTGGTGGAAGTGCAGGGCATTGGCGAGGCGACCATTGAGTCA
AATCGCGATCATATGACGCTCAACTAA
ATGAAACTGATCTCATCCTTCCTGTGTGCCATCACCCTGCTGTTCAGCGCCGTGGCTTTTGCAGCCCCGTCAGCCCCCGT
CAACATCAATACCGCTGATATTGAAACACTGTCAGAGCTCGACGGCATTGGTCCCAAAAAAGCCGAGGCCATTGTGGCCT
GGCGCGATGAGAACGGCGAGTTTGTCAGCCTGGATCAACTGGTGGAAGTGCAGGGCATTGGCGAGGCGACCATTGAGTCA
AATCGCGATCATATGACGCTCAACTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
43.878 |
100 |
0.489 |
| comEA | Vibrio cholerae strain A1552 |
43.878 |
100 |
0.489 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
38.889 |
100 |
0.477 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
55.072 |
78.409 |
0.432 |
| comE | Neisseria gonorrhoeae MS11 |
42.045 |
100 |
0.42 |
| comE | Neisseria gonorrhoeae MS11 |
42.045 |
100 |
0.42 |
| comE | Neisseria gonorrhoeae MS11 |
42.045 |
100 |
0.42 |
| comE | Neisseria gonorrhoeae MS11 |
42.045 |
100 |
0.42 |
| comEA | Legionella pneumophila strain ERS1305867 |
36.842 |
100 |
0.398 |
| comEA | Legionella pneumophila str. Paris |
36.842 |
100 |
0.398 |
| Cj0011c | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
38.372 |
97.727 |
0.375 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
51.613 |
70.455 |
0.364 |