Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | OJY61_RS04280 | Genome accession | NZ_CP110176 |
| Coordinates | 871853..872170 (-) | Length | 105 a.a. |
| NCBI ID | WP_010675541.1 | Uniprot ID | A0A3G9I3Z2 |
| Organism | Aeromonas caviae strain SVJ23 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 866853..877170
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OJY61_RS04260 (OJY61_12875) | - | 867244..867918 (-) | 675 | WP_039041329.1 | DnaT-like ssDNA-binding domain-containing protein | - |
| OJY61_RS04265 (OJY61_12880) | - | 868194..869165 (+) | 972 | WP_029314797.1 | response regulator | - |
| OJY61_RS04270 (OJY61_12885) | - | 869236..870633 (-) | 1398 | WP_029314796.1 | peptide MFS transporter | - |
| OJY61_RS04275 (OJY61_12890) | galU | 870847..871758 (-) | 912 | WP_010675542.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| OJY61_RS04280 (OJY61_12895) | comEA | 871853..872170 (-) | 318 | WP_010675541.1 | ComEA family DNA-binding protein | Machinery gene |
| OJY61_RS04285 (OJY61_12900) | cysQ | 872337..873107 (+) | 771 | WP_010675540.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| OJY61_RS04290 (OJY61_12905) | - | 873171..873467 (-) | 297 | WP_010675539.1 | YciI family protein | - |
| OJY61_RS04295 (OJY61_12910) | - | 873492..874043 (-) | 552 | WP_010675538.1 | septation protein A | - |
| OJY61_RS04300 (OJY61_12915) | - | 874148..875653 (-) | 1506 | WP_010675537.1 | aminotransferase class V-fold PLP-dependent enzyme | - |
| OJY61_RS04305 (OJY61_12920) | - | 875845..876477 (+) | 633 | WP_029314795.1 | hemolysin III family protein | - |
Sequence
Protein
Download Length: 105 a.a. Molecular weight: 11006.90 Da Isoelectric Point: 10.1059
>NTDB_id=752885 OJY61_RS04280 WP_010675541.1 871853..872170(-) (comEA) [Aeromonas caviae strain SVJ23]
MNKKTLIAALLLSCLPLLSQPLLAADKAATKPVATTQVKESGKINLNTASAGELTALKGIGEKKAQAIIDHREKQGKFTS
VDQLADVSGIGPATLEANRDMIIVK
MNKKTLIAALLLSCLPLLSQPLLAADKAATKPVATTQVKESGKINLNTASAGELTALKGIGEKKAQAIIDHREKQGKFTS
VDQLADVSGIGPATLEANRDMIIVK
Nucleotide
Download Length: 318 bp
>NTDB_id=752885 OJY61_RS04280 WP_010675541.1 871853..872170(-) (comEA) [Aeromonas caviae strain SVJ23]
ATGAACAAGAAGACCCTGATCGCCGCACTGCTGCTGAGCTGCCTCCCCCTGTTGAGCCAACCTCTGCTGGCCGCCGACAA
GGCGGCGACCAAGCCTGTGGCCACCACCCAAGTCAAGGAGAGCGGCAAGATCAATCTCAATACCGCCAGTGCCGGCGAGC
TCACCGCCCTGAAAGGCATTGGCGAGAAGAAGGCACAGGCCATCATCGACCACAGGGAGAAGCAGGGCAAGTTCACCTCC
GTCGATCAACTGGCGGACGTCAGTGGCATCGGACCTGCCACGCTGGAAGCAAACCGGGACATGATTATCGTCAAGTAA
ATGAACAAGAAGACCCTGATCGCCGCACTGCTGCTGAGCTGCCTCCCCCTGTTGAGCCAACCTCTGCTGGCCGCCGACAA
GGCGGCGACCAAGCCTGTGGCCACCACCCAAGTCAAGGAGAGCGGCAAGATCAATCTCAATACCGCCAGTGCCGGCGAGC
TCACCGCCCTGAAAGGCATTGGCGAGAAGAAGGCACAGGCCATCATCGACCACAGGGAGAAGCAGGGCAAGTTCACCTCC
GTCGATCAACTGGCGGACGTCAGTGGCATCGGACCTGCCACGCTGGAAGCAAACCGGGACATGATTATCGTCAAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
50.943 |
100 |
0.514 |
| comEA | Vibrio cholerae strain A1552 |
50.943 |
100 |
0.514 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
45.045 |
100 |
0.476 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
46.535 |
96.19 |
0.448 |
| comEA | Legionella pneumophila strain ERS1305867 |
44 |
95.238 |
0.419 |
| comEA | Legionella pneumophila str. Paris |
44 |
95.238 |
0.419 |
| comEA/celA/cilE | Streptococcus mitis NCTC 12261 |
51.852 |
77.143 |
0.4 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
43.75 |
91.429 |
0.4 |
| comEA/celA/cilE | Streptococcus mitis SK321 |
54.795 |
69.524 |
0.381 |
| comEA | Acinetobacter baylyi ADP1 |
46.914 |
77.143 |
0.362 |