Detailed information NTG0073506

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: FNL60_RS01320
• Genome accession: NZ_AP019720
• Coordinates: 249478..249873 (+)
• Length: 131 a.a.
• NCBI ID: WP_002263454.1
• Uniprot ID: Q8DS68
• Organism: Streptococcus mutans strain NBRC 13955
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 244478..254873

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FNL60_RS01280 (SM3g_02200)	-	244576..245238 (+)	663	WP_002266816.1	CPBP family intramembrane glutamic endopeptidase	-
FNL60_RS01285 (SM3g_02210)	proC	245324..246094 (-)	771	WP_002267840.1	pyrroline-5-carboxylate reductase	-
FNL60_RS01290 (SM3g_02220)	pepA	246150..247217 (-)	1068	WP_002264005.1	glutamyl aminopeptidase	-
FNL60_RS01295 (SM3g_02230)	-	247277..247585 (+)	309	WP_002264004.1	DUF4651 domain-containing protein	-
FNL60_RS01300 (SM3g_02240)	-	247563..247892 (+)	330	WP_002264003.1	thioredoxin family protein	-
FNL60_RS01305 (SM3g_02250)	ytpR	247889..248515 (+)	627	WP_002264002.1	YtpR family tRNA-binding protein	-
FNL60_RS01310 (SM3g_02260)	-	248604..249035 (+)	432	WP_018110218.1	MarR family winged helix-turn-helix transcriptional regulator	-
FNL60_RS01315 (SM3g_02270)	-	249035..249391 (+)	357	WP_002271268.1	rhodanese-like domain-containing protein	-
FNL60_RS01320 (SM3g_02280)	ssbA	249478..249873 (+)	396	WP_002263454.1	single-stranded DNA-binding protein	Machinery gene
FNL60_RS01325 (SM3g_02290)	-	250289..251251 (+)	963	WP_002263455.1	sugar ABC transporter substrate-binding protein	-
FNL60_RS01330 (SM3g_02300)	-	251251..252573 (+)	1323	WP_002263456.1	sensor histidine kinase	-
FNL60_RS01335 (SM3g_02310)	-	252573..253253 (+)	681	WP_002263457.1	response regulator transcription factor	-
FNL60_RS01340 (SM3g_02320)	-	253246..254553 (+)	1308	WP_002263458.1	extracellular solute-binding protein	-
FNL60_RS01345	-	254619..254822 (+)	204	Protein_230	hypothetical protein	-

Sequence

Protein

• Length: 131 a.a.
• Molecular weight: 14841.90 Da
• Isoelectric Point: 6.4855

>NTDB_id=73506 FNL60_RS01320 WP_002263454.1 249478..249873(+) (ssbA) [Streptococcus mutans strain NBRC 13955]
MYNKVILIGRLVATPEMVKTPKDKSVTRVTLAVNRRFKSQDGEKQADFVNVVLWGRLAETIASYGSKGSLISLDGELRTR
KYEKDGVTHFVTEVLGHSFQLLESRAQRAMRENNSENDLADLVLEEEELPF

Nucleotide

• Length: 396 bp

>NTDB_id=73506 FNL60_RS01320 WP_002263454.1 249478..249873(+) (ssbA) [Streptococcus mutans strain NBRC 13955]
ATGTATAATAAAGTTATTTTGATTGGTCGTTTAGTTGCGACACCTGAAATGGTAAAAACACCAAAGGATAAGTCTGTTAC
GCGCGTGACACTGGCTGTCAATCGGCGATTTAAAAGTCAAGATGGGGAAAAGCAGGCTGATTTTGTCAATGTTGTTCTTT
GGGGCAGATTGGCAGAAACAATAGCTTCCTATGGTAGTAAGGGAAGTCTCATCTCTCTTGATGGAGAATTGCGTACCCGT
AAATATGAAAAAGATGGCGTCACTCATTTTGTGACTGAAGTTTTGGGACACTCCTTTCAATTACTGGAAAGTCGTGCTCA
ACGTGCTATGCGTGAAAATAATTCTGAAAATGATTTGGCCGATTTGGTTCTGGAAGAGGAGGAACTCCCTTTTTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (3-101)

3D structure

• AlphaFold DB: Q8DS68

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Streptococcus mutans UA159	100	100	1
ssbB	Streptococcus sobrinus strain NIDR 6715-7	78.626	100	0.786
ssbB/cilA	Streptococcus pneumoniae TIGR4	75.573	100	0.756
ssbB/cilA	Streptococcus pneumoniae Rx1	74.809	100	0.748
ssbB/cilA	Streptococcus pneumoniae D39	74.809	100	0.748
ssbB/cilA	Streptococcus pneumoniae R6	74.809	100	0.748
ssbB/cilA	Streptococcus mitis SK321	74.809	100	0.748
ssbB/cilA	Streptococcus mitis NCTC 12261	73.282	100	0.733
ssbB	Lactococcus lactis subsp. cremoris KW2	58.036	85.496	0.496
ssbA	Bacillus subtilis subsp. subtilis str. 168	50	80.916	0.405