Detailed information NTG0722253

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: NX819_RS19655
• Genome accession: NZ_CP103351
• Coordinates: 3782026..3783171 (+)
• Length: 381 a.a.
• NCBI ID: WP_086344441.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SRCM115947
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3777026..3788171

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NX819_RS19635 (NX819_19635)	albF	3777042..3778322 (+)	1281	WP_003242974.1	pitrilysin family protein	-
NX819_RS19640 (NX819_19640)	albG	3778319..3779020 (+)	702	WP_003243391.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
NX819_RS19645 (NX819_19645)	ywhL	3779026..3780402 (-)	1377	WP_110109508.1	YncE family protein	-
NX819_RS19650 (NX819_19650)	ywhK	3780441..3781796 (-)	1356	WP_015250986.1	YncE family protein	-
NX819_RS21555	-	3781793..3782023 (-)	231	WP_024572000.1	hypothetical protein	-
NX819_RS19655 (NX819_19655)	rapF	3782026..3783171 (+)	1146	WP_086344441.1	response regulator aspartate phosphatase RapF	Regulator
NX819_RS19660 (NX819_19660)	phrF	3783155..3783274 (+)	120	WP_041334633.1	phosphatase RapF inhibitor PhrF	Regulator
NX819_RS19665 (NX819_19665)	-	3783372..3783834 (+)	463	Protein_3818	YbaK/EbsC family protein	-
NX819_RS19670 (NX819_19670)	speB	3783866..3784738 (-)	873	WP_003227545.1	agmatinase	-
NX819_RS19675 (NX819_19675)	speE	3784799..3785629 (-)	831	WP_003227543.1	spermidine synthase	-
NX819_RS19680 (NX819_19680)	pbpG	3785832..3787907 (+)	2076	WP_015384942.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45631.11 Da
• Isoelectric Point: 5.1503

>NTDB_id=722253 NX819_RS19655 WP_086344441.1 3782026..3783171(+) (rapF) [Bacillus subtilis strain SRCM115947]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AITYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=722253 NX819_RS19655 WP_086344441.1 3782026..3783171(+) (rapF) [Bacillus subtilis strain SRCM115947]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTGATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAATTTCTTCAG
AGGCATGTATGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAAGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAACATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGGAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATAACTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-290)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	99.475	100	0.995
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572