Detailed information NTG0721375

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: NXS96_RS20230
• Genome accession: NZ_CP103066
• Coordinates: 3845656..3846801 (+)
• Length: 381 a.a.
• NCBI ID: WP_003227549.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain 0137
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3840656..3851801

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NXS96_RS20210 (NXS96_20210)	albF	3840672..3841952 (+)	1281	WP_003242974.1	pitrilysin family protein	-
NXS96_RS20215 (NXS96_20215)	albG	3841949..3842650 (+)	702	WP_003243391.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
NXS96_RS20220 (NXS96_20220)	ywhL	3842656..3844032 (-)	1377	WP_003244415.1	YncE family protein	-
NXS96_RS20225 (NXS96_20225)	ywhK	3844071..3845426 (-)	1356	WP_003227552.1	YncE family protein	-
NXS96_RS22180	-	3845423..3845653 (-)	231	WP_009968328.1	hypothetical protein	-
NXS96_RS20230 (NXS96_20230)	rapF	3845656..3846801 (+)	1146	WP_003227549.1	response regulator aspartate phosphatase RapF	Regulator
NXS96_RS20235 (NXS96_20235)	phrF	3846785..3846904 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
NXS96_RS20240 (NXS96_20240)	ywhH	3847003..3847476 (+)	474	WP_003227547.1	YbaK/EbsC family protein	-
NXS96_RS20245 (NXS96_20245)	speB	3847508..3848380 (-)	873	WP_003227545.1	agmatinase	-
NXS96_RS20250 (NXS96_20250)	speE	3848441..3849271 (-)	831	WP_003227543.1	spermidine synthase	-
NXS96_RS20255 (NXS96_20255)	pbpG	3849473..3851548 (+)	2076	WP_003227540.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45609.09 Da
• Isoelectric Point: 5.1503

>NTDB_id=721375 NXS96_RS20230 WP_003227549.1 3845656..3846801(+) (rapF) [Bacillus subtilis strain 0137]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=721375 NXS96_RS20230 WP_003227549.1 3845656..3846801(+) (rapF) [Bacillus subtilis strain 0137]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAACTTCTTCAG
AGGCATGTACGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAACATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGGAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATACCTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATAGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	100	100	1
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572