Detailed information NTG0071976

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: EL263_RS10110
• Genome accession: NZ_AP018938
• Coordinates: 1875139..1875543 (-)
• Length: 134 a.a.
• NCBI ID: WP_000588020.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain ATCC 49619
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1870139..1880543

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL263_RS10075 (SPAT_1908)	rnpA	1870553..1870924 (-)	372	WP_000739246.1	ribonuclease P protein component	-
EL263_RS12005	-	1870941..1871072 (-)	132	WP_000768904.1	hypothetical protein	-
EL263_RS10080 (SPAT_1909)	-	1871073..1872263 (-)	1191	WP_000167766.1	acetate kinase	-
EL263_RS10085 (SPAT_1910)	comYH	1872314..1873267 (-)	954	WP_050308921.1	class I SAM-dependent methyltransferase	Machinery gene
EL263_RS10090	-	1873328..1873922 (-)	595	Protein_1882	class I SAM-dependent methyltransferase	-
EL263_RS10095 (SPAT_1913)	comGG/cglG	1874059..1874472 (-)	414	WP_050102600.1	competence type IV pilus minor pilin ComGG	Machinery gene
EL263_RS10100 (SPAT_1914)	comGF/cglF	1874450..1874911 (-)	462	WP_000250544.1	competence type IV pilus minor pilin ComGF	Machinery gene
EL263_RS10105 (SPAT_1915)	comGE/cglE	1874874..1875176 (-)	303	WP_000413380.1	competence type IV pilus minor pilin ComGE	Machinery gene
EL263_RS10110 (SPAT_1916)	comGD/cglD	1875139..1875543 (-)	405	WP_000588020.1	competence type IV pilus minor pilin ComGD	Machinery gene
EL263_RS10115 (SPAT_1917)	comGC/cglC	1875536..1875862 (-)	327	WP_000738632.1	comG operon protein ComGC	Machinery gene
EL263_RS10120 (SPAT_1918)	comGB/cglB	1875864..1876880 (-)	1017	WP_114880773.1	competence type IV pilus assembly protein ComGB	Machinery gene
EL263_RS10125 (SPAT_1919)	comGA/cglA/cilD	1876828..1877769 (-)	942	WP_000249549.1	competence type IV pilus ATPase ComGA	Machinery gene
EL263_RS10130 (SPAT_1920)	-	1877845..1878210 (-)	366	WP_000286415.1	DUF1033 family protein	-
EL263_RS10135 (SPAT_1921)	-	1878361..1879419 (-)	1059	WP_000649468.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 134 a.a.
• Molecular weight: 14662.89 Da
• Isoelectric Point: 10.2164

>NTDB_id=71976 EL263_RS10110 WP_000588020.1 1875139..1875543(-) (comGD/cglD) [Streptococcus pneumoniae strain ATCC 49619]
MIKAFTMLESLLVLGLVSILALGLSGSVQSTFAAVEEQIFFMEFEELYRETQKRSVASQQKTSLNLDGQTISNGSQKLPV
PKGIQVPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 405 bp

>NTDB_id=71976 EL263_RS10110 WP_000588020.1 1875139..1875543(-) (comGD/cglD) [Streptococcus pneumoniae strain ATCC 49619]
ATGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTGGTTTTGGGTCTTGTGAGTATCCTTGCCTTGGGCTTGTCCGGCTC
TGTTCAGTCCACTTTTGCGGCAGTAGAGGAACAGATTTTCTTTATGGAATTTGAAGAACTCTATCGGGAAACCCAAAAAC
GCAGTGTAGCCAGTCAGCAAAAGACTAGTCTGAACTTAGATGGGCAGACGATTAGCAATGGCAGTCAAAAGTTGCCAGTC
CCTAAAGGAATTCAGGTCCCATCAGGCCAAAGTATTACATTTGACCGTGCTGGGGGCAATTCGTCCCTGGCTAAGGTTGA
ATTTCAGACCAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATGGAAAAATTAAACGCATTAAGGAAACAAAAA
ATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus pneumoniae TIGR4	97.761	100	0.978
comGD/cglD	Streptococcus pneumoniae Rx1	97.015	100	0.97
comGD/cglD	Streptococcus pneumoniae D39	97.015	100	0.97
comGD/cglD	Streptococcus pneumoniae R6	97.015	100	0.97
comGD/cglD	Streptococcus mitis SK321	96.269	100	0.963
comGD/cglD	Streptococcus mitis NCTC 12261	96.992	99.254	0.963
comYD	Streptococcus gordonii str. Challis substr. CH1	59.055	94.776	0.56
comYD	Streptococcus mutans UA140	50	95.522	0.478
comYD	Streptococcus mutans UA159	50	95.522	0.478