Detailed information NTG0071948

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: EL263_RS07430
• Genome accession: NZ_AP018938
• Coordinates: 1402738..1403208 (-)
• Length: 156 a.a.
• NCBI ID: WP_050084733.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain ATCC 49619
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 1397738..1408208

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL263_RS07400 (SPAT_1410)	-	1398313..1399248 (-)	936	WP_000036043.1	manganese-dependent inorganic pyrophosphatase	-
EL263_RS07405 (SPAT_1411)	-	1399319..1399618 (-)	300	WP_000349601.1	GIY-YIG nuclease family protein	-
EL263_RS07410 (SPAT_1412)	-	1399608..1400357 (-)	750	WP_000390784.1	tRNA1(Val) (adenine(37)-N6)-methyltransferase	-
EL263_RS07415 (SPAT_1413)	-	1400411..1400770 (-)	360	WP_000689600.1	S1 RNA-binding domain-containing protein	-
EL263_RS07420 (SPAT_1414)	-	1400772..1402172 (-)	1401	WP_000339024.1	bifunctional Cof-type HAD-IIB family hydrolase/peptidylprolyl isomerase	-
EL263_RS07425 (SPAT_1415)	rpsR	1402467..1402706 (-)	240	WP_000068664.1	30S ribosomal protein S18	-
EL263_RS07430 (SPAT_1416)	ssbA	1402738..1403208 (-)	471	WP_050084733.1	single-stranded DNA-binding protein SsbA	Machinery gene
EL263_RS07435 (SPAT_1417)	rpsF	1403220..1403510 (-)	291	WP_001151785.1	30S ribosomal protein S6	-
EL263_RS07440 (SPAT_1418)	asnS	1403663..1405006 (-)	1344	WP_000167151.1	asparagine--tRNA ligase	-
EL263_RS11345 (SPAT_1419)	-	1405025..1405390 (-)	366	WP_050084731.1	VOC family protein	-
EL263_RS07445 (SPAT_1420)	-	1405383..1406570 (-)	1188	WP_050221144.1	pyridoxal phosphate-dependent aminotransferase	-
EL263_RS07450 (SPAT_1421)	-	1406567..1407055 (-)	489	WP_000747253.1	DUF5590 domain-containing protein	-
EL263_RS07460 (SPAT_1422)	-	1407376..1407924 (+)	549	WP_000039618.1	NADPH-dependent FMN reductase	-

Sequence

Protein

• Length: 156 a.a.
• Molecular weight: 17324.19 Da
• Isoelectric Point: 5.2065

>NTDB_id=71948 EL263_RS07430 WP_050084733.1 1402738..1403208(-) (ssbA) [Streptococcus pneumoniae strain ATCC 49619]
MINNVVLVGRMTRDAELRYTPSNVAVATFTLAVNRTFKSQNGEREADFINVVMWRQQAENLANWAKKGSLIGVTGRIQTR
SYDNQQGQRVYVTEVVAENFQMLESRSVREGHTGGAYSAPTASYSAPTNSVPDFSRNENPFGATNPLDISDDDLPF

Nucleotide

• Length: 471 bp

>NTDB_id=71948 EL263_RS07430 WP_050084733.1 1402738..1403208(-) (ssbA) [Streptococcus pneumoniae strain ATCC 49619]
ATGATTAACAATGTTGTACTTGTAGGGCGTATGACACGTGACGCTGAGTTGCGTTATACCCCATCAAATGTAGCAGTTGC
GACTTTTACTCTTGCAGTAAACCGTACATTTAAGAGTCAAAATGGTGAACGTGAGGCTGATTTTATCAATGTCGTTATGT
GGCGCCAACAGGCTGAAAATCTTGCTAACTGGGCTAAAAAAGGCTCACTTATCGGGGTGACAGGTCGTATCCAGACTCGT
AGTTACGATAACCAGCAAGGACAACGTGTCTACGTGACAGAGGTCGTGGCTGAGAATTTCCAAATGTTGGAAAGCCGTAG
TGTGCGTGAGGGTCACACAGGTGGAGCTTACTCTGCACCAACTGCAAGCTATTCAGCACCTACAAATTCAGTACCAGACT
TTTCACGTAATGAAAATCCATTTGGAGCAACAAACCCATTGGATATTTCAGATGATGATTTACCATTCTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (2-103)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Bacillus subtilis subsp. subtilis str. 168	55.814	100	0.615
ssb	Latilactobacillus sakei subsp. sakei 23K	54.118	100	0.59
ssbB/cilA	Streptococcus pneumoniae TIGR4	51.282	75	0.385
ssbB	Bacillus subtilis subsp. subtilis str. 168	55.66	67.949	0.378
ssbB/cilA	Streptococcus mitis SK321	50.427	75	0.378
ssbB/cilA	Streptococcus mitis NCTC 12261	50.427	75	0.378
ssbB	Streptococcus sobrinus strain NIDR 6715-7	54.128	69.872	0.378
ssbB/cilA	Streptococcus pneumoniae Rx1	52.294	69.872	0.365
ssbB/cilA	Streptococcus pneumoniae D39	52.294	69.872	0.365
ssbB/cilA	Streptococcus pneumoniae R6	52.294	69.872	0.365