Detailed information
Bioinformatically predicted
Overview
| Name | comA/nlmT | Type | Regulator |
| Locus tag | EL277_RS12650 | Genome accession | NZ_AP018936 |
| Coordinates | 515697..516422 (-) | Length | 241 a.a. |
| NCBI ID | WP_167750760.1 | Uniprot ID | - |
| Organism | Streptococcus pneumoniae strain NU83127 | ||
| Function | transport of ComC (predicted from homology) Competence regulation |
||
Genomic Context
Location: 510697..521422
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL277_RS02670 (SPNU_0501) | - | 510745..511083 (+) | 339 | WP_000876675.1 | LytTR family DNA-binding domain-containing protein | - |
| EL277_RS02675 (SPNU_0502) | comE/blpR | 511088..511825 (+) | 738 | WP_001219119.1 | response regulator transcription factor | Regulator |
| EL277_RS02680 (SPNU_0504) | - | 511839..513168 (+) | 1330 | Protein_503 | sensor histidine kinase | - |
| EL277_RS02685 (SPNU_0505) | blpC | 513212..513367 (-) | 156 | WP_000358811.1 | quorum-sensing system pheromone BlpC | - |
| EL277_RS02690 (SPNU_0506) | - | 513424..514785 (-) | 1362 | WP_001069103.1 | bacteriocin secretion accessory protein | - |
| EL277_RS12645 (SPNU_0507) | comA/nlmT | 514796..515707 (-) | 912 | WP_001827226.1 | ATP-binding cassette domain-containing protein | Regulator |
| EL277_RS12650 (SPNU_0508) | comA/nlmT | 515697..516422 (-) | 726 | WP_167750760.1 | ABC transporter transmembrane domain-containing protein | Regulator |
| EL277_RS12655 (SPNU_0509) | comA/nlmT | 516367..516954 (-) | 588 | WP_000205166.1 | cysteine peptidase family C39 domain-containing protein | Regulator |
| EL277_RS02705 (SPNU_0510) | - | 517236..517439 (+) | 204 | WP_001093262.1 | bacteriocin class II family protein | - |
| EL277_RS02710 (SPNU_0511) | - | 517757..517960 (+) | 204 | WP_000411016.1 | hypothetical protein | - |
| EL277_RS02720 | - | 518963..519767 (+) | 805 | Protein_511 | IS5 family transposase | - |
| EL277_RS02725 (SPNU_0515) | blpM | 519917..520171 (+) | 255 | WP_000379879.1 | two-peptide bacteriocin subunit BlpM | - |
| EL277_RS02730 (SPNU_0516) | blpN | 520187..520390 (+) | 204 | WP_001099492.1 | two-peptide bacteriocin subunit BlpN | - |
| EL277_RS02740 (SPNU_0517) | cipB | 520634..520783 (+) | 150 | WP_001818346.1 | bacteriocin-like peptide BlpO | Regulator |
| EL277_RS02745 | - | 520887..521006 (+) | 120 | WP_000346296.1 | PncF family bacteriocin immunity protein | - |
Sequence
Protein
Download Length: 241 a.a. Molecular weight: 27490.04 Da Isoelectric Point: 4.8430
>NTDB_id=71844 EL277_RS12650 WP_167750760.1 515697..516422(-) (comA/nlmT) [Streptococcus pneumoniae strain NU83127]
MVTIINIGGSYYLQGILDEYIPNQMKSTLGIISVGLVITYILQQVMSFSRDYLLTVLSQRLSIDVILSYIRHIFELPMSF
FATRRTGEIISRFTDANSIIDALASTILSLFLDVSILILVEGVLLAQNPNLFLLSLISIPIYMFIIFSFMKPFEKMNHDV
MQSNSMVSSAIIEDINGIETIKSLTSEENRYQNIDSEFVDYLEKSFKLSKYSILQTSLKQGNKISSEYPYPMVWRSISHV
E
MVTIINIGGSYYLQGILDEYIPNQMKSTLGIISVGLVITYILQQVMSFSRDYLLTVLSQRLSIDVILSYIRHIFELPMSF
FATRRTGEIISRFTDANSIIDALASTILSLFLDVSILILVEGVLLAQNPNLFLLSLISIPIYMFIIFSFMKPFEKMNHDV
MQSNSMVSSAIIEDINGIETIKSLTSEENRYQNIDSEFVDYLEKSFKLSKYSILQTSLKQGNKISSEYPYPMVWRSISHV
E
Nucleotide
Download Length: 726 bp
>NTDB_id=71844 EL277_RS12650 WP_167750760.1 515697..516422(-) (comA/nlmT) [Streptococcus pneumoniae strain NU83127]
TTGGTCACTATTATCAATATAGGTGGTTCTTACTATCTCCAAGGAATCTTGGATGAATACATTCCAAATCAGATGAAATC
AACTTTAGGAATCATCTCAGTTGGTCTGGTTATCACCTATATCCTCCAACAAGTCATGAGCTTCTCCAGAGATTATCTCC
TAACCGTTCTGAGTCAGAGATTAAGTATTGATGTGATTTTATCCTATATTCGCCATATTTTTGAACTTCCCATGTCTTTC
TTTGCGACACGTCGTACAGGAGAAATCATTTCACGGTTCACAGATGCTAACTCTATTATAGATGCCTTGGCTTCTACCAT
TCTTTCTCTTTTTCTGGATGTTTCTATTCTGATTCTTGTAGAGGGAGTCTTGCTGGCACAAAACCCTAATCTCTTCCTTC
TTTCTCTTATTTCCATTCCTATATACATGTTCATCATCTTTTCTTTTATGAAGCCTTTCGAAAAAATGAACCATGATGTC
ATGCAAAGTAATTCTATGGTTAGCTCTGCCATTATCGAAGATATCAACGGGATTGAAACTATAAAGTCGCTCACGAGTGA
AGAAAATCGCTATCAAAATATAGACAGCGAATTTGTAGATTATTTGGAAAAATCCTTTAAGCTCAGTAAATATTCTATTT
TACAAACGAGTTTAAAGCAGGGGAACAAAATTAGTTCTGAATATCCTTATCCTATGGTTTGGCGCTCAATTAGTCATGTC
GAGTAA
TTGGTCACTATTATCAATATAGGTGGTTCTTACTATCTCCAAGGAATCTTGGATGAATACATTCCAAATCAGATGAAATC
AACTTTAGGAATCATCTCAGTTGGTCTGGTTATCACCTATATCCTCCAACAAGTCATGAGCTTCTCCAGAGATTATCTCC
TAACCGTTCTGAGTCAGAGATTAAGTATTGATGTGATTTTATCCTATATTCGCCATATTTTTGAACTTCCCATGTCTTTC
TTTGCGACACGTCGTACAGGAGAAATCATTTCACGGTTCACAGATGCTAACTCTATTATAGATGCCTTGGCTTCTACCAT
TCTTTCTCTTTTTCTGGATGTTTCTATTCTGATTCTTGTAGAGGGAGTCTTGCTGGCACAAAACCCTAATCTCTTCCTTC
TTTCTCTTATTTCCATTCCTATATACATGTTCATCATCTTTTCTTTTATGAAGCCTTTCGAAAAAATGAACCATGATGTC
ATGCAAAGTAATTCTATGGTTAGCTCTGCCATTATCGAAGATATCAACGGGATTGAAACTATAAAGTCGCTCACGAGTGA
AGAAAATCGCTATCAAAATATAGACAGCGAATTTGTAGATTATTTGGAAAAATCCTTTAAGCTCAGTAAATATTCTATTT
TACAAACGAGTTTAAAGCAGGGGAACAAAATTAGTTCTGAATATCCTTATCCTATGGTTTGGCGCTCAATTAGTCATGTC
GAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comA/nlmT | Streptococcus mutans UA159 |
75.446 |
92.946 |
0.701 |
| comA | Streptococcus mitis SK321 |
70 |
91.286 |
0.639 |
| comA | Streptococcus pneumoniae Rx1 |
70 |
91.286 |
0.639 |
| comA | Streptococcus pneumoniae D39 |
70 |
91.286 |
0.639 |
| comA | Streptococcus pneumoniae R6 |
70 |
91.286 |
0.639 |
| comA | Streptococcus mitis NCTC 12261 |
70 |
91.286 |
0.639 |
| comA | Streptococcus pneumoniae TIGR4 |
69.545 |
91.286 |
0.635 |
| comA | Streptococcus gordonii str. Challis substr. CH1 |
67.411 |
92.946 |
0.627 |