Detailed information
Bioinformatically predicted
Overview
| Name | comP | Type | Machinery gene |
| Locus tag | URS_RS06755 | Genome accession | NZ_AP018824 |
| Coordinates | 1400712..1401230 (-) | Length | 172 a.a. |
| NCBI ID | WP_126624252.1 | Uniprot ID | - |
| Organism | Acinetobacter ursingii strain M3 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1395712..1406230
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| URS_RS06740 (URS_1377) | - | 1396334..1398271 (+) | 1938 | WP_126624249.1 | hypothetical protein | - |
| URS_RS06745 (URS_1378) | - | 1398268..1400325 (+) | 2058 | WP_126624250.1 | hypothetical protein | - |
| URS_RS06750 (URS_1379) | - | 1400329..1400685 (+) | 357 | WP_126624251.1 | hypothetical protein | - |
| URS_RS06755 (URS_1380) | comP | 1400712..1401230 (-) | 519 | WP_126624252.1 | pilin | Machinery gene |
| URS_RS06760 (URS_1381) | comP | 1401994..1402407 (+) | 414 | WP_126624253.1 | pilin | Machinery gene |
| URS_RS06765 (URS_1382) | - | 1402468..1403691 (+) | 1224 | WP_126624254.1 | O-antigen ligase | - |
| URS_RS06770 (URS_1383) | - | 1403685..1404107 (+) | 423 | WP_126624255.1 | hypothetical protein | - |
| URS_RS06775 (URS_1384) | - | 1404293..1405957 (+) | 1665 | WP_126624256.1 | PglL family O-oligosaccharyltransferase | - |
Sequence
Protein
Download Length: 172 a.a. Molecular weight: 17330.82 Da Isoelectric Point: 7.5881
>NTDB_id=71578 URS_RS06755 WP_126624252.1 1400712..1401230(-) (comP) [Acinetobacter ursingii strain M3]
MNAQKGFTLIELMIVVAIIGILAAIALPAYQDYTIRARVSEALSVAGGAKTTVAENITANGGVLPAASANGNKGACAGVS
LFDAKSATDAKNVGNVEKLDCTPATGAIVVTMNDKGKGVTLTLTPTADTAAVKGATPDKDVAAVNNPGIAWKCTTTEGSF
KYVPAECRNTAS
MNAQKGFTLIELMIVVAIIGILAAIALPAYQDYTIRARVSEALSVAGGAKTTVAENITANGGVLPAASANGNKGACAGVS
LFDAKSATDAKNVGNVEKLDCTPATGAIVVTMNDKGKGVTLTLTPTADTAAVKGATPDKDVAAVNNPGIAWKCTTTEGSF
KYVPAECRNTAS
Nucleotide
Download Length: 519 bp
>NTDB_id=71578 URS_RS06755 WP_126624252.1 1400712..1401230(-) (comP) [Acinetobacter ursingii strain M3]
ATGAATGCTCAAAAAGGCTTTACATTAATCGAGCTGATGATAGTTGTCGCTATTATTGGTATTCTTGCTGCAATCGCGCT
TCCTGCATACCAAGACTACACAATCCGTGCACGTGTTTCTGAAGCCCTCAGTGTTGCTGGTGGTGCAAAAACAACAGTAG
CAGAAAATATTACTGCAAATGGAGGGGTACTACCTGCTGCATCAGCAAATGGTAACAAAGGTGCATGTGCTGGAGTTAGC
CTATTTGATGCTAAATCTGCAACAGATGCAAAAAATGTTGGTAACGTTGAAAAGCTTGATTGTACTCCTGCGACAGGTGC
TATTGTTGTAACAATGAATGATAAAGGTAAAGGTGTTACACTAACTTTAACCCCTACTGCTGATACTGCTGCTGTTAAAG
GTGCTACACCAGACAAAGACGTAGCAGCAGTTAATAACCCTGGTATTGCTTGGAAGTGTACAACTACTGAAGGTTCTTTC
AAATATGTTCCAGCTGAATGCCGCAACACTGCTAGCTAA
ATGAATGCTCAAAAAGGCTTTACATTAATCGAGCTGATGATAGTTGTCGCTATTATTGGTATTCTTGCTGCAATCGCGCT
TCCTGCATACCAAGACTACACAATCCGTGCACGTGTTTCTGAAGCCCTCAGTGTTGCTGGTGGTGCAAAAACAACAGTAG
CAGAAAATATTACTGCAAATGGAGGGGTACTACCTGCTGCATCAGCAAATGGTAACAAAGGTGCATGTGCTGGAGTTAGC
CTATTTGATGCTAAATCTGCAACAGATGCAAAAAATGTTGGTAACGTTGAAAAGCTTGATTGTACTCCTGCGACAGGTGC
TATTGTTGTAACAATGAATGATAAAGGTAAAGGTGTTACACTAACTTTAACCCCTACTGCTGATACTGCTGCTGTTAAAG
GTGCTACACCAGACAAAGACGTAGCAGCAGTTAATAACCCTGGTATTGCTTGGAAGTGTACAACTACTGAAGGTTCTTTC
AAATATGTTCCAGCTGAATGCCGCAACACTGCTAGCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comP | Acinetobacter baylyi ADP1 |
51.176 |
98.837 |
0.506 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
42.222 |
100 |
0.442 |
| pilE | Neisseria gonorrhoeae MS11 |
40.11 |
100 |
0.424 |
| pilA2 | Legionella pneumophila str. Paris |
41.212 |
95.93 |
0.395 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
41.212 |
95.93 |
0.395 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
39.157 |
96.512 |
0.378 |
| pilA | Pseudomonas aeruginosa PAK |
36.782 |
100 |
0.372 |
| pilA/pilA1 | Eikenella corrodens VA1 |
48.819 |
73.837 |
0.36 |