Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   K6K39_RS10060 Genome accession   NZ_AP024135
Coordinates   2284011..2285744 (+) Length   577 a.a.
NCBI ID   WP_059249360.1    Uniprot ID   -
Organism   Streptomyces sp. EAS-AB2608 strain NBRC 114648     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2279011..2290744
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K6K39_RS10025 (EASAB2608_02079) - 2280311..2280613 (+) 303 WP_059249352.1 hypothetical protein -
  K6K39_RS10030 (EASAB2608_02080) pcp 2280658..2281308 (+) 651 WP_221334276.1 pyroglutamyl-peptidase I -
  K6K39_RS10050 (EASAB2608_02081) - 2282007..2282312 (+) 306 WP_059249356.1 hypothetical protein -
  K6K39_RS10055 (EASAB2608_02082) - 2282419..2283858 (+) 1440 WP_221334277.1 FGGY family carbohydrate kinase -
  K6K39_RS10060 (EASAB2608_02083) rcrP 2284011..2285744 (+) 1734 WP_059249360.1 ABC transporter ATP-binding protein Regulator
  K6K39_RS10065 (EASAB2608_02084) rcrQ 2285744..2287672 (+) 1929 WP_059249362.1 ABC transporter ATP-binding protein Regulator
  K6K39_RS10070 (EASAB2608_02085) - 2287703..2288890 (-) 1188 WP_391043972.1 sigma-70 family RNA polymerase sigma factor -
  K6K39_RS10075 (EASAB2608_02086) - 2289039..2289383 (+) 345 WP_059249366.1 hypothetical protein -

Sequence

Protein


Download         Length: 577 a.a.        Molecular weight: 62399.71 Da        Isoelectric Point: 6.2738

>NTDB_id=71579 K6K39_RS10060 WP_059249360.1 2284011..2285744(+) (rcrP) [Streptomyces sp. EAS-AB2608 strain NBRC 114648]
MLIRLLRTCLRPYKKPIAVLVVLQLLQTCATLYLPTLNADIIDNGVVKGDTGYILSFGALMIGISLAQVVCNIGAVYYGA
RTASALGRDVRGAVFDRVQSFSAREVGHFGAPSLITRTTNDVQQVQMLVLMTFTLMVSAPIMCVGGIVLALGLDVPLSAV
LVAVVPVLGISVALIVRRLRPLFRSMQVRLDTVNRVLREQITGNRVIRAFVRDEYEQGRFGKANAELTDMQLATGRMLAL
MFPIVMTVVNVSSIAVVWFGAHRIDSGRMAIGDLTAFLAYLMQIVMSVMMATFMFMMVPRAEVCAERIQEVLDTESSVVP
PAAPVTELRAHGHLEIRGAGFRYPGAEEAVLKSIDMVARPGETTAVIGSTGSGKSTLLGLVPRLFDATEGEVLVDGVDVR
EVDPRLLARTVGLVPQKPYLFAGTVATNLRYGNPDATDEELWHALEVAQAKDFVSKLEGGLDAPIAQGGTNVSGGQRQRL
AIARTLVQRPEIYLFDDSFSALDYATDAALRAALARETAEATVVIVAQRVATIRDADRIIVLDEGRVVGTGRHAELMASN
ETYREIVLSQLTEAEAA

Nucleotide


Download         Length: 1734 bp        

>NTDB_id=71579 K6K39_RS10060 WP_059249360.1 2284011..2285744(+) (rcrP) [Streptomyces sp. EAS-AB2608 strain NBRC 114648]
GTGCTCATACGACTTCTGCGGACCTGTCTCAGGCCCTACAAGAAACCCATCGCTGTACTGGTGGTGCTCCAGTTACTGCA
GACCTGCGCCACCCTCTACCTGCCCACGCTCAACGCGGACATCATCGACAACGGTGTCGTGAAGGGCGACACGGGTTACA
TCCTGTCCTTCGGCGCCCTGATGATCGGCATCTCGCTGGCGCAGGTGGTGTGCAACATCGGTGCCGTGTACTACGGCGCC
CGGACCGCCTCCGCGCTCGGCCGGGACGTGCGCGGCGCCGTCTTCGACCGGGTCCAGTCCTTCTCCGCGCGTGAGGTGGG
TCACTTCGGCGCACCCTCCCTCATCACCCGTACGACGAACGACGTGCAGCAGGTCCAGATGCTGGTCCTGATGACGTTCA
CCCTGATGGTGTCGGCGCCCATCATGTGCGTGGGCGGGATCGTGCTGGCGCTCGGCCTGGACGTGCCGCTGTCCGCGGTG
CTGGTCGCGGTCGTGCCGGTGCTCGGCATCTCCGTGGCGCTCATCGTGCGCCGGCTGCGCCCGCTGTTCCGGTCGATGCA
GGTCCGGCTGGACACCGTGAACCGGGTGCTGCGCGAGCAGATCACCGGCAACCGGGTGATCCGCGCCTTCGTCCGCGACG
AGTACGAGCAGGGCCGGTTCGGGAAGGCCAACGCCGAGCTGACCGACATGCAGCTGGCCACCGGCCGGATGCTCGCCCTG
ATGTTCCCGATCGTCATGACGGTGGTGAACGTGTCGTCCATCGCGGTGGTGTGGTTCGGCGCCCACCGCATCGACAGCGG
CCGGATGGCCATCGGCGACCTCACCGCGTTCCTCGCCTATCTGATGCAGATCGTGATGTCCGTGATGATGGCCACCTTCA
TGTTCATGATGGTGCCGCGCGCGGAGGTGTGCGCCGAACGCATCCAGGAGGTGCTGGACACCGAGTCCAGCGTCGTGCCG
CCGGCCGCCCCCGTCACCGAGCTGCGCGCGCACGGGCACCTGGAGATCCGGGGTGCGGGCTTCCGCTACCCGGGTGCCGA
GGAGGCGGTGCTGAAGTCGATCGACATGGTGGCCCGGCCGGGCGAGACGACCGCCGTGATCGGCTCCACCGGCAGCGGCA
AGTCCACACTCCTCGGACTCGTCCCCCGGCTCTTCGACGCCACCGAGGGCGAGGTGCTGGTGGACGGCGTCGACGTCCGG
GAGGTCGACCCGCGGCTGCTGGCCAGGACGGTGGGACTGGTGCCCCAGAAGCCGTACCTGTTCGCGGGCACGGTCGCCAC
GAACCTGCGTTACGGCAATCCGGACGCCACGGACGAGGAGCTGTGGCACGCGCTGGAGGTGGCGCAGGCCAAGGACTTCG
TGAGCAAGCTGGAGGGCGGCCTGGACGCGCCGATCGCGCAGGGCGGCACCAATGTCTCCGGAGGTCAGCGGCAGCGGCTC
GCCATCGCCCGCACACTGGTGCAGCGCCCGGAGATCTACCTCTTCGACGACTCCTTCTCCGCGCTCGACTACGCCACCGA
CGCGGCCCTGCGCGCGGCGCTCGCCCGGGAGACCGCCGAGGCGACCGTCGTCATCGTGGCCCAGCGGGTGGCGACCATCC
GGGACGCGGACCGGATCATCGTGCTGGACGAGGGCCGGGTGGTCGGCACCGGCCGGCACGCCGAGCTGATGGCATCCAAC
GAGACCTACCGGGAGATCGTCCTCTCCCAGCTGACGGAAGCGGAGGCCGCCTGA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(19-288)

ABC transporter (ABC_tran)

(351-498)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

39.594

100

0.406

Multiple sequence alignment