Detailed information
Bioinformatically predicted
Overview
| Name | comP | Type | Machinery gene |
| Locus tag | URS_RS06760 | Genome accession | NZ_AP018824 |
| Coordinates | 1401994..1402407 (+) | Length | 137 a.a. |
| NCBI ID | WP_126624253.1 | Uniprot ID | - |
| Organism | Acinetobacter ursingii strain M3 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1396994..1407407
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| URS_RS06745 (URS_1378) | - | 1398268..1400325 (+) | 2058 | WP_126624250.1 | hypothetical protein | - |
| URS_RS06750 (URS_1379) | - | 1400329..1400685 (+) | 357 | WP_126624251.1 | hypothetical protein | - |
| URS_RS06755 (URS_1380) | comP | 1400712..1401230 (-) | 519 | WP_126624252.1 | pilin | Machinery gene |
| URS_RS06760 (URS_1381) | comP | 1401994..1402407 (+) | 414 | WP_126624253.1 | pilin | Machinery gene |
| URS_RS06765 (URS_1382) | - | 1402468..1403691 (+) | 1224 | WP_126624254.1 | O-antigen ligase | - |
| URS_RS06770 (URS_1383) | - | 1403685..1404107 (+) | 423 | WP_126624255.1 | hypothetical protein | - |
| URS_RS06775 (URS_1384) | - | 1404293..1405957 (+) | 1665 | WP_126624256.1 | PglL family O-oligosaccharyltransferase | - |
| URS_RS06780 (URS_1385) | - | 1406165..1407298 (+) | 1134 | WP_126624257.1 | Fic family protein | - |
Sequence
Protein
Download Length: 137 a.a. Molecular weight: 13944.02 Da Isoelectric Point: 7.5206
>NTDB_id=71579 URS_RS06760 WP_126624253.1 1401994..1402407(+) (comP) [Acinetobacter ursingii strain M3]
MECTILMIVIAIIGILAAIAIPAYQDYTIRARVSEAITALSAAKATVSENIANNGGVIASGACNGYTNLASATANLTSTT
CTDATGVVVASTTAKAGGIQIKMTPTVNADKSVVWSCGTLASSYKYVPAECRNTVSF
MECTILMIVIAIIGILAAIAIPAYQDYTIRARVSEAITALSAAKATVSENIANNGGVIASGACNGYTNLASATANLTSTT
CTDATGVVVASTTAKAGGIQIKMTPTVNADKSVVWSCGTLASSYKYVPAECRNTVSF
Nucleotide
Download Length: 414 bp
>NTDB_id=71579 URS_RS06760 WP_126624253.1 1401994..1402407(+) (comP) [Acinetobacter ursingii strain M3]
ATGGAATGTACTATATTGATGATCGTAATTGCGATTATTGGTATTTTGGCTGCAATTGCAATTCCTGCTTATCAGGATTA
TACAATTCGGGCACGTGTATCAGAAGCGATTACGGCATTGTCTGCTGCAAAAGCAACAGTAAGTGAAAATATTGCGAATA
ATGGTGGTGTAATTGCATCTGGTGCATGTAATGGTTATACAAATCTTGCTTCTGCTACGGCAAACCTAACGTCAACTACT
TGTACTGATGCTACAGGTGTGGTTGTGGCAAGTACCACTGCAAAAGCGGGTGGAATTCAAATTAAAATGACACCTACTGT
GAACGCGGATAAATCAGTAGTTTGGAGTTGTGGAACATTAGCATCTTCATATAAATATGTTCCAGCAGAATGTCGTAATA
CTGTTTCTTTCTAA
ATGGAATGTACTATATTGATGATCGTAATTGCGATTATTGGTATTTTGGCTGCAATTGCAATTCCTGCTTATCAGGATTA
TACAATTCGGGCACGTGTATCAGAAGCGATTACGGCATTGTCTGCTGCAAAAGCAACAGTAAGTGAAAATATTGCGAATA
ATGGTGGTGTAATTGCATCTGGTGCATGTAATGGTTATACAAATCTTGCTTCTGCTACGGCAAACCTAACGTCAACTACT
TGTACTGATGCTACAGGTGTGGTTGTGGCAAGTACCACTGCAAAAGCGGGTGGAATTCAAATTAAAATGACACCTACTGT
GAACGCGGATAAATCAGTAGTTTGGAGTTGTGGAACATTAGCATCTTCATATAAATATGTTCCAGCAGAATGTCGTAATA
CTGTTTCTTTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comP | Acinetobacter baylyi ADP1 |
51.825 |
100 |
0.518 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
54.264 |
94.161 |
0.511 |
| pilA2 | Legionella pneumophila str. Paris |
54.264 |
94.161 |
0.511 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
40.397 |
100 |
0.445 |
| pilE | Neisseria gonorrhoeae strain FA1090 |
36.424 |
100 |
0.401 |
| pilE | Neisseria gonorrhoeae MS11 |
34.416 |
100 |
0.387 |