Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | K6J73_RS03610 | Genome accession | NZ_AP018780 |
| Coordinates | 716731..717180 (+) | Length | 149 a.a. |
| NCBI ID | WP_005660016.1 | Uniprot ID | Q5D8C4 |
| Organism | Haemophilus influenzae strain CHBN-IV-1 isolate 13H36 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 711731..722180
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K6J73_RS03590 (CHBNIV1_06790) | rsmE | 712192..712929 (-) | 738 | WP_005660011.1 | 16S rRNA (uracil(1498)-N(3))-methyltransferase | - |
| K6J73_RS03595 (CHBNIV1_06800) | lnt | 712979..714508 (-) | 1530 | WP_343213443.1 | apolipoprotein N-acyltransferase | - |
| K6J73_RS03600 (CHBNIV1_06810) | corC | 714531..715430 (-) | 900 | WP_005656283.1 | CNNM family magnesium/cobalt transport protein CorC | - |
| K6J73_RS03605 (CHBNIV1_06820) | ampD | 716053..716616 (-) | 564 | WP_005660014.1 | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | - |
| K6J73_RS03610 (CHBNIV1_06830) | pilA | 716731..717180 (+) | 450 | WP_005660016.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| K6J73_RS03615 (CHBNIV1_06840) | pilB | 717177..718574 (+) | 1398 | WP_005660019.1 | GspE/PulE family protein | Machinery gene |
| K6J73_RS03620 (CHBNIV1_06850) | pilC | 718571..719791 (+) | 1221 | WP_005660021.1 | type II secretion system F family protein | Machinery gene |
| K6J73_RS03625 (CHBNIV1_06860) | pilD | 719788..720480 (+) | 693 | WP_221253448.1 | A24 family peptidase | Machinery gene |
| K6J73_RS03630 (CHBNIV1_06870) | rho | 720534..721796 (-) | 1263 | WP_005648966.1 | transcription termination factor Rho | - |
Sequence
Protein
Download Length: 149 a.a. Molecular weight: 15382.77 Da Isoelectric Point: 8.7960
>NTDB_id=71287 K6J73_RS03610 WP_005660016.1 716731..717180(+) (pilA) [Haemophilus influenzae strain CHBN-IV-1 isolate 13H36]
MKLTTLQTLKKGFTLIELMIVIAIIAILATIAIPSYQNYTKKAAVSELLQASAPYKADVELCVYSTGKPSTCSGGSNGIA
ADITTAKGYVASVKTQSGGITVKGNGTLANMEYILQATGNAATGVTWTTTCKGTDASLFPANFCGSVTQ
MKLTTLQTLKKGFTLIELMIVIAIIAILATIAIPSYQNYTKKAAVSELLQASAPYKADVELCVYSTGKPSTCSGGSNGIA
ADITTAKGYVASVKTQSGGITVKGNGTLANMEYILQATGNAATGVTWTTTCKGTDASLFPANFCGSVTQ
Nucleotide
Download Length: 450 bp
>NTDB_id=71287 K6J73_RS03610 WP_005660016.1 716731..717180(+) (pilA) [Haemophilus influenzae strain CHBN-IV-1 isolate 13H36]
ATGAAATTAACAACACTGCAAACCTTGAAAAAAGGGTTTACATTAATCGAGCTAATGATTGTGATTGCAATTATTGCTAT
TTTAGCCACTATCGCAATTCCTTCTTATCAAAATTATACCAAAAAAGCTGCGGTATCCGAATTACTGCAAGCTTCTGCGC
CTTATAAGGCTGATGTGGAATTATGCGTTTATAGCACAGGCAAACCTTCTACTTGCTCAGGAGGAAGCAATGGAATTGCA
GCTGATATTACAACAGCAAAAGGCTATGTAGCCTCAGTGAAAACTCAATCAGGTGGTATTACAGTAAAAGGGAATGGCAC
ATTGGCAAATATGGAATATATTTTGCAAGCTACAGGTAATGCTGCAACAGGTGTAACTTGGACAACAACTTGCAAAGGAA
CGGATGCCTCTTTATTTCCAGCAAATTTTTGCGGAAGTGTCACACAATGA
ATGAAATTAACAACACTGCAAACCTTGAAAAAAGGGTTTACATTAATCGAGCTAATGATTGTGATTGCAATTATTGCTAT
TTTAGCCACTATCGCAATTCCTTCTTATCAAAATTATACCAAAAAAGCTGCGGTATCCGAATTACTGCAAGCTTCTGCGC
CTTATAAGGCTGATGTGGAATTATGCGTTTATAGCACAGGCAAACCTTCTACTTGCTCAGGAGGAAGCAATGGAATTGCA
GCTGATATTACAACAGCAAAAGGCTATGTAGCCTCAGTGAAAACTCAATCAGGTGGTATTACAGTAAAAGGGAATGGCAC
ATTGGCAAATATGGAATATATTTTGCAAGCTACAGGTAATGCTGCAACAGGTGTAACTTGGACAACAACTTGCAAAGGAA
CGGATGCCTCTTTATTTCCAGCAAATTTTTGCGGAAGTGTCACACAATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Haemophilus influenzae Rd KW20 |
91.946 |
100 |
0.919 |
| pilA | Haemophilus influenzae 86-028NP |
90.604 |
100 |
0.906 |
| pilA | Glaesserella parasuis strain SC1401 |
56.376 |
100 |
0.564 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
39.189 |
99.329 |
0.389 |
| pilA | Vibrio campbellii strain DS40M4 |
40.426 |
94.631 |
0.383 |
| pilA2 | Legionella pneumophila str. Paris |
40 |
93.96 |
0.376 |