Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | K6J55_RS03635 | Genome accession | NZ_AP018767 |
| Coordinates | 723073..723522 (+) | Length | 149 a.a. |
| NCBI ID | WP_048942287.1 | Uniprot ID | Q5D8C5 |
| Organism | Haemophilus influenzae strain CHBN-II-4 isolate 13H33 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 718073..728522
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K6J55_RS03615 (CHBNII4_06850) | rsmE | 718534..719271 (-) | 738 | WP_011271976.1 | 16S rRNA (uracil(1498)-N(3))-methyltransferase | - |
| K6J55_RS03620 (CHBNII4_06860) | lnt | 719321..720850 (-) | 1530 | WP_079989936.1 | apolipoprotein N-acyltransferase | - |
| K6J55_RS03625 (CHBNII4_06870) | corC | 720873..721772 (-) | 900 | WP_005656283.1 | CNNM family magnesium/cobalt transport protein CorC | - |
| K6J55_RS03630 (CHBNII4_06880) | ampD | 722394..722957 (-) | 564 | WP_048942277.1 | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | - |
| K6J55_RS03635 (CHBNII4_06890) | pilA | 723073..723522 (+) | 450 | WP_048942287.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| K6J55_RS03640 (CHBNII4_06900) | pilB | 723519..724913 (+) | 1395 | WP_110459385.1 | GspE/PulE family protein | Machinery gene |
| K6J55_RS03645 (CHBNII4_06910) | pilC | 724910..726130 (+) | 1221 | WP_048942289.1 | type II secretion system F family protein | Machinery gene |
| K6J55_RS03650 (CHBNII4_06920) | pilD | 726127..726819 (+) | 693 | WP_048942290.1 | A24 family peptidase | Machinery gene |
| K6J55_RS03655 (CHBNII4_06930) | rho | 726873..728135 (-) | 1263 | WP_005648966.1 | transcription termination factor Rho | - |
Sequence
Protein
Download Length: 149 a.a. Molecular weight: 15569.05 Da Isoelectric Point: 8.4607
>NTDB_id=70832 K6J55_RS03635 WP_048942287.1 723073..723522(+) (pilA) [Haemophilus influenzae strain CHBN-II-4 isolate 13H33]
MKLTTQQTLKKGFTLIELMIVIAIIAILATIAIPSYKNYTKKAAVSELLQASAPYKADVELCVYSTNEITNCMGGKNGIA
ADITTAKGYVASVKTQSGGITVKGDGTLANMEYILQATGNAAAGVTWTTTCKGTDASLFPANFCGSITQ
MKLTTQQTLKKGFTLIELMIVIAIIAILATIAIPSYKNYTKKAAVSELLQASAPYKADVELCVYSTNEITNCMGGKNGIA
ADITTAKGYVASVKTQSGGITVKGDGTLANMEYILQATGNAAAGVTWTTTCKGTDASLFPANFCGSITQ
Nucleotide
Download Length: 450 bp
>NTDB_id=70832 K6J55_RS03635 WP_048942287.1 723073..723522(+) (pilA) [Haemophilus influenzae strain CHBN-II-4 isolate 13H33]
ATGAAACTAACAACACAGCAAACCTTGAAAAAAGGGTTTACATTAATAGAGCTAATGATTGTGATTGCAATTATTGCTAT
TTTAGCCACCATCGCAATTCCTTCTTATAAAAATTATACTAAAAAAGCAGCGGTATCTGAATTACTGCAAGCTTCTGCGC
CTTATAAGGCTGATGTGGAATTATGTGTATATAGCACAAATGAAATAACAAATTGTATGGGTGGAAAAAATGGTATTGCA
GCTGATATTACAACAGCAAAAGGCTATGTAGCCTCAGTGAAAACTCAATCGGGTGGCATTACCGTAAAAGGGGATGGCAC
ATTGGCAAATATGGAATATATTTTGCAAGCTACAGGTAATGCTGCAGCAGGTGTAACTTGGACAACAACCTGCAAAGGAA
CGGATGCCTCTTTATTTCCAGCAAATTTTTGCGGAAGTATCACACAATGA
ATGAAACTAACAACACAGCAAACCTTGAAAAAAGGGTTTACATTAATAGAGCTAATGATTGTGATTGCAATTATTGCTAT
TTTAGCCACCATCGCAATTCCTTCTTATAAAAATTATACTAAAAAAGCAGCGGTATCTGAATTACTGCAAGCTTCTGCGC
CTTATAAGGCTGATGTGGAATTATGTGTATATAGCACAAATGAAATAACAAATTGTATGGGTGGAAAAAATGGTATTGCA
GCTGATATTACAACAGCAAAAGGCTATGTAGCCTCAGTGAAAACTCAATCGGGTGGCATTACCGTAAAAGGGGATGGCAC
ATTGGCAAATATGGAATATATTTTGCAAGCTACAGGTAATGCTGCAGCAGGTGTAACTTGGACAACAACCTGCAAAGGAA
CGGATGCCTCTTTATTTCCAGCAAATTTTTGCGGAAGTATCACACAATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Haemophilus influenzae 86-028NP |
93.289 |
100 |
0.933 |
| pilA | Haemophilus influenzae Rd KW20 |
92.617 |
100 |
0.926 |
| pilA | Glaesserella parasuis strain SC1401 |
55.034 |
100 |
0.55 |
| pilA2 | Legionella pneumophila str. Paris |
40.816 |
98.658 |
0.403 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
40.816 |
98.658 |
0.403 |
| pilA | Vibrio campbellii strain DS40M4 |
40.426 |
94.631 |
0.383 |