Detailed information
Bioinformatically predicted
Overview
| Name | pilA2 | Type | Machinery gene |
| Locus tag | OYT1_RS04085 | Genome accession | NZ_AP018738 |
| Coordinates | 850276..850683 (+) | Length | 135 a.a. |
| NCBI ID | WP_062626880.1 | Uniprot ID | A0A2Z6GA69 |
| Organism | Ferriphaselus amnicola strain OYT1 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 845276..855683
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OYT1_RS04065 (OYT1_ch0833) | sucD | 845513..846394 (+) | 882 | WP_062626877.1 | succinate--CoA ligase subunit alpha | - |
| OYT1_RS04070 (OYT1_ch0834) | - | 846508..847248 (+) | 741 | WP_062626878.1 | TerC family protein | - |
| OYT1_RS04075 (OYT1_ch0835) | - | 847259..847684 (+) | 426 | WP_062627025.1 | universal stress protein | - |
| OYT1_RS04080 (OYT1_ch0836) | - | 847712..850090 (+) | 2379 | WP_062626879.1 | GspE/PulE family protein | - |
| OYT1_RS04085 (OYT1_ch0837) | pilA2 | 850276..850683 (+) | 408 | WP_062626880.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| OYT1_RS04090 (OYT1_ch0838) | - | 850746..852164 (-) | 1419 | WP_062626881.1 | M48 family metalloprotease | - |
| OYT1_RS04095 (OYT1_ch0839) | - | 852264..852584 (+) | 321 | WP_062626882.1 | rhodanese-like domain-containing protein | - |
| OYT1_RS04100 (OYT1_ch0840) | - | 852593..853837 (-) | 1245 | WP_062626883.1 | MFS transporter | - |
Sequence
Protein
Download Length: 135 a.a. Molecular weight: 13518.59 Da Isoelectric Point: 8.1135
>NTDB_id=70627 OYT1_RS04085 WP_062626880.1 850276..850683(+) (pilA2) [Ferriphaselus amnicola strain OYT1]
MKKVQQGFTLIELMIVVAIIGILAAVAIPAYSNYTKKAKFSEVLSISESYQKAVTVCQNDLGTFTGCAHATNGIPAAPAA
TANLASVAVADGVVTATGTAASGGYTSVLTPALNAAGSAITWTQSGTCLAAGFCK
MKKVQQGFTLIELMIVVAIIGILAAVAIPAYSNYTKKAKFSEVLSISESYQKAVTVCQNDLGTFTGCAHATNGIPAAPAA
TANLASVAVADGVVTATGTAASGGYTSVLTPALNAAGSAITWTQSGTCLAAGFCK
Nucleotide
Download Length: 408 bp
>NTDB_id=70627 OYT1_RS04085 WP_062626880.1 850276..850683(+) (pilA2) [Ferriphaselus amnicola strain OYT1]
ATGAAAAAAGTACAACAAGGTTTCACCCTGATCGAACTGATGATCGTTGTCGCCATCATCGGTATCTTGGCCGCCGTCGC
GATCCCGGCTTACAGCAACTACACCAAGAAAGCTAAGTTCAGCGAAGTGCTGTCCATCAGCGAATCCTATCAAAAGGCAG
TGACCGTGTGCCAGAACGATCTGGGCACCTTCACTGGTTGCGCACATGCGACTAATGGTATCCCCGCTGCGCCCGCTGCT
ACCGCTAATCTGGCCAGCGTTGCAGTAGCTGATGGCGTTGTTACTGCTACAGGAACAGCTGCATCGGGTGGTTATACTTC
GGTGTTGACGCCTGCATTGAATGCCGCAGGTAGCGCGATCACTTGGACACAAAGTGGCACTTGCTTGGCAGCTGGCTTCT
GTAAGTAA
ATGAAAAAAGTACAACAAGGTTTCACCCTGATCGAACTGATGATCGTTGTCGCCATCATCGGTATCTTGGCCGCCGTCGC
GATCCCGGCTTACAGCAACTACACCAAGAAAGCTAAGTTCAGCGAAGTGCTGTCCATCAGCGAATCCTATCAAAAGGCAG
TGACCGTGTGCCAGAACGATCTGGGCACCTTCACTGGTTGCGCACATGCGACTAATGGTATCCCCGCTGCGCCCGCTGCT
ACCGCTAATCTGGCCAGCGTTGCAGTAGCTGATGGCGTTGTTACTGCTACAGGAACAGCTGCATCGGGTGGTTATACTTC
GGTGTTGACGCCTGCATTGAATGCCGCAGGTAGCGCGATCACTTGGACACAAAGTGGCACTTGCTTGGCAGCTGGCTTCT
GTAAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA2 | Legionella pneumophila str. Paris |
49.275 |
100 |
0.504 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
47.826 |
100 |
0.489 |
| pilA | Glaesserella parasuis strain SC1401 |
40 |
100 |
0.444 |
| pilA | Haemophilus influenzae Rd KW20 |
40 |
100 |
0.415 |
| pilA | Haemophilus influenzae 86-028NP |
40.146 |
100 |
0.407 |
| comP | Acinetobacter baylyi ADP1 |
40.458 |
97.037 |
0.393 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
43.089 |
91.111 |
0.393 |
| pilA/pilA1 | Eikenella corrodens VA1 |
37.594 |
98.519 |
0.37 |
| pilA | Vibrio campbellii strain DS40M4 |
60.494 |
60 |
0.363 |