Detailed information NTG0705104

Bioinformatically predicted

Overview

• Name: pilQ
• Type: Machinery gene
• Locus tag: L4174_RS01245
• Genome accession: NZ_CP100425
• Coordinates: 290168..291481 (+)
• Length: 437 a.a.
• NCBI ID: WP_248144413.1
• Uniprot ID: -
• Organism: Photobacterium sp. CCB-ST2H9
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 285168..296481

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L4174_RS01225 (L4174_001225)	pilM	287543..288490 (+)	948	WP_248144417.1	type IV pilus biogenesis protein PilM	-
L4174_RS01230 (L4174_001230)	-	288484..289065 (+)	582	WP_248144416.1	PilN domain-containing protein	-
L4174_RS01235 (L4174_001235)	-	289058..289687 (+)	630	WP_248144415.1	type 4a pilus biogenesis protein PilO	-
L4174_RS01240 (L4174_001240)	-	289684..290112 (+)	429	WP_248144414.1	pilus assembly protein PilP	-
L4174_RS01245 (L4174_001245)	pilQ	290168..291481 (+)	1314	WP_248144413.1	type IV pilus secretin PilQ	Machinery gene
L4174_RS01250 (L4174_001250)	aroK	291688..292206 (+)	519	WP_248144412.1	shikimate kinase AroK	-
L4174_RS01255 (L4174_001255)	aroB	292227..293300 (+)	1074	WP_248144411.1	3-dehydroquinate synthase	-
L4174_RS01260 (L4174_001260)	-	293316..294962 (+)	1647	WP_248144410.1	AAA family ATPase	-
L4174_RS01265 (L4174_001265)	dam	295090..295917 (+)	828	WP_248144409.1	adenine-specific DNA-methyltransferase	-
L4174_RS01270 (L4174_001270)	-	295895..296092 (-)	198	WP_248144408.1	DUF2970 domain-containing protein	-

Sequence

Protein

• Length: 437 a.a.
• Molecular weight: 47356.21 Da
• Isoelectric Point: 4.8632

>NTDB_id=705104 L4174_RS01245 WP_248144413.1 290168..291481(+) (pilQ) [Photobacterium sp. CCB-ST2H9]
MHHLCILLALFWCLSAGALATPLQSADLDDQENTISLNFQDVPVRQLLQMMADHRQDNLVISDAVQGNITLHLTDVPWSQ
AMDSILTLKGLAYRRQGNVMMVAPRAELAGGTAGQAESQTSLKTRVIPIRYAKATELAALLSGSEGQSSLLTAQGALHVD
DRTNALIVKDVAESLESLLLIIDRLDQPVRQVQIEARIVSMNEKDTADLGVRWGMLENNGSVTVGGSIDSNLAALNSDGT
PDLNDFLNVNLGAQHGAARIAFQVARLGDQLLDLELSALQAEEKAEIISSPRLVTTNKKMAYIEQGTEIPYLEAASSGAV
SVSFKKAVLSLMVTPQITPDDKLILDLEVTQNKPGETVNTGTGQVVAIDTQRIGTQVLVDHGETIVLGGIFQHQSSQSVR
KVPLLGDMPLLGRLFRQTLEREGRRELLIFVTPKILR

Nucleotide

• Length: 1314 bp

>NTDB_id=705104 L4174_RS01245 WP_248144413.1 290168..291481(+) (pilQ) [Photobacterium sp. CCB-ST2H9]
ATGCATCACCTCTGCATTCTATTGGCTCTGTTTTGGTGTCTGTCGGCCGGGGCGCTGGCGACTCCGCTTCAATCGGCGGA
TTTAGACGACCAAGAAAATACGATCTCACTCAACTTCCAGGATGTGCCTGTGCGCCAGCTGCTGCAGATGATGGCAGATC
ACCGGCAGGATAATCTGGTCATTTCCGATGCGGTGCAGGGCAATATCACCCTGCACCTGACCGATGTTCCCTGGTCACAG
GCGATGGACAGTATTCTGACCCTGAAAGGGTTGGCCTACAGGCGGCAGGGGAACGTGATGATGGTTGCGCCCAGAGCTGA
GCTGGCTGGCGGAACTGCTGGTCAGGCAGAGTCTCAGACATCACTGAAGACCCGGGTGATCCCGATTCGCTATGCCAAGG
CGACGGAGCTGGCAGCGTTGCTGTCCGGTTCGGAGGGGCAGTCCAGTTTACTCACTGCACAAGGTGCTTTGCATGTGGAC
GACAGAACCAATGCGCTGATTGTGAAAGATGTCGCGGAGAGCCTGGAAAGTCTGCTGCTGATTATTGATCGATTGGATCA
ACCGGTCCGGCAGGTGCAGATTGAAGCCCGGATTGTCAGCATGAATGAGAAAGATACGGCCGATCTCGGCGTACGCTGGG
GGATGCTTGAAAACAACGGCAGCGTGACTGTCGGCGGCTCAATTGACAGTAATCTGGCAGCACTGAACAGCGACGGGACA
CCGGATCTGAACGACTTTCTGAACGTTAATCTTGGTGCGCAGCACGGCGCCGCTCGAATTGCGTTTCAGGTTGCCCGGCT
GGGGGATCAATTGTTGGATTTGGAGCTGTCTGCACTGCAGGCCGAAGAGAAAGCTGAAATTATTTCCAGCCCGCGTTTGG
TCACTACCAATAAGAAAATGGCCTATATTGAGCAGGGGACTGAGATCCCCTACCTGGAGGCAGCTTCCAGCGGTGCCGTC
TCGGTCTCATTCAAGAAAGCAGTGCTGAGCCTGATGGTGACCCCGCAGATTACACCGGACGATAAGCTGATTCTGGATTT
GGAAGTCACCCAGAACAAACCGGGAGAAACCGTGAACACGGGGACGGGTCAGGTGGTGGCCATTGATACACAGCGGATTG
GGACGCAGGTGCTGGTGGACCATGGTGAAACTATTGTTCTGGGTGGCATTTTTCAGCATCAGTCCAGTCAGTCGGTCCGC
AAAGTCCCTTTGCTGGGGGATATGCCGTTGCTGGGCCGTCTGTTCCGGCAGACTCTGGAGCGGGAGGGCAGGCGCGAGTT
ACTCATTTTTGTGACGCCGAAAATCCTGCGTTAG

Domains

Predicted by InterproScan.

• Bacterial type II/III secretion system short domain (Secretin_N) (124-191)

• Bacterial type II and III secretion system protein (Secretin) (278-437)

• Secretin and TonB N terminus short domain (STN) (58-104)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilQ	Vibrio campbellii strain DS40M4	55.604	100	0.579
pilQ	Vibrio cholerae O1 biovar El Tor strain E7946	56.941	97.254	0.554
pilQ	Vibrio cholerae strain A1552	56.941	97.254	0.554
pilQ	Legionella pneumophila strain Lp02	45.564	95.423	0.435
pilQ	Legionella pneumophila strain ERS1305867	45.564	95.423	0.435
comQ	Acinetobacter baylyi ADP1	41.591	100	0.419
pilQ	Pseudomonas aeruginosa PAK	42.424	98.169	0.416
pilQ	Acinetobacter baumannii strain A118	39.78	100	0.414
pilQ	Acinetobacter baumannii D1279779	39.78	100	0.414
comE	Haemophilus influenzae Rd KW20	39.13	100	0.391
comE	Haemophilus influenzae 86-028NP	38.902	100	0.389