Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   M9H69_RS10335 Genome accession   NZ_CP097843
Coordinates   2060930..2062120 (+) Length   396 a.a.
NCBI ID   WP_084911880.1    Uniprot ID   A0A1X0WM35
Organism   Streptococcus oralis strain HP01     
Function   repress competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2055930..2067120
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M9H69_RS10295 (M9H69_10295) - 2056988..2057530 (+) 543 WP_000665086.1 TetR/AcrR family transcriptional regulator -
  M9H69_RS10310 (M9H69_10310) comE 2057770..2058522 (-) 753 WP_250315577.1 competence system response regulator transcription factor ComE Regulator
  M9H69_RS10315 (M9H69_10315) comD 2058519..2059838 (-) 1320 WP_250315578.1 competence system sensor histidine kinase ComD Regulator
  M9H69_RS10320 (M9H69_10320) comC/comC2 2059859..2059984 (-) 126 WP_195215739.1 competence-stimulating peptide ComC Regulator
  M9H69_RS10330 (M9H69_10330) rlmH 2060266..2060745 (-) 480 WP_250315579.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  M9H69_RS10335 (M9H69_10335) htrA 2060930..2062120 (+) 1191 WP_084911880.1 S1C family serine protease Regulator
  M9H69_RS10340 (M9H69_10340) spo0J 2062178..2062936 (+) 759 WP_250315580.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 396 a.a.        Molecular weight: 41991.85 Da        Isoelectric Point: 6.2506

>NTDB_id=692964 M9H69_RS10335 WP_084911880.1 2060930..2062120(+) (htrA) [Streptococcus oralis strain HP01]
MKHLQKFYKKGVTFLVIILIGFLSGALGSFVTLQLYQKQGNQATNNNSGTVTQTSYKNENSTTQAVNKIKDAVVSVITYS
ANKQSSVFGTEESNSDTDNQQIASEGSGVIYKKNENDAYIVTNTHVINGASKVDIRLADGTKVPGEIIGSDTFSDIAVVK
ISSEKVTTVAEFGDSSQLNVGETAIAIGSPLGSEYANTVTQGIISSLNRNVSLKSEDGQAISTKAIQTDTAINPGNSGGP
LVNIQGQVIGITSSKIASNGGTSVEGLGFAIPSNDVQNIIKQLESDGKVTRPALGIQMVNLSNVGANDLRKLNIPSGLTS
GVVVRSVQSNMPANGHLQKYDVITKVDEKEITSSTDLQHALYNHAIGDTIKITYYRNGKEETTSIKLDKNSGDLEH

Nucleotide


Download         Length: 1191 bp        

>NTDB_id=692964 M9H69_RS10335 WP_084911880.1 2060930..2062120(+) (htrA) [Streptococcus oralis strain HP01]
ATGAAACACTTACAAAAATTTTACAAAAAAGGAGTTACTTTTCTTGTAATTATTCTAATAGGATTTTTGAGTGGTGCACT
AGGAAGTTTTGTAACATTGCAACTTTATCAAAAACAAGGAAATCAAGCTACAAATAATAATTCTGGCACTGTAACTCAAA
CATCATACAAGAATGAAAACTCAACTACTCAAGCAGTGAATAAAATTAAGGATGCTGTTGTATCAGTCATTACTTATTCT
GCTAATAAACAAAGTAGTGTATTTGGAACGGAAGAATCAAATTCTGATACGGATAATCAACAGATTGCAAGTGAAGGATC
AGGTGTCATCTATAAAAAGAACGAAAATGATGCTTATATTGTAACAAATACTCACGTTATTAACGGAGCTTCAAAAGTCG
ATATCCGTTTAGCTGATGGTACAAAAGTCCCTGGTGAAATTATTGGATCGGATACCTTCTCTGATATTGCTGTCGTAAAA
ATTTCTTCAGAAAAAGTTACAACAGTAGCAGAATTTGGTGATTCAAGCCAGCTTAATGTTGGAGAAACAGCGATTGCTAT
TGGTAGTCCTTTAGGTTCAGAATATGCTAATACAGTTACACAGGGAATCATCTCAAGTCTTAATCGAAATGTTTCTCTAA
AATCTGAAGATGGTCAAGCTATTTCAACAAAAGCCATTCAAACAGATACGGCCATTAACCCTGGTAACTCTGGTGGTCCG
CTTGTAAATATTCAAGGACAAGTAATTGGTATTACATCAAGTAAGATTGCAAGTAATGGTGGAACATCTGTAGAAGGTCT
TGGTTTTGCAATTCCTTCAAACGATGTACAAAATATTATTAAACAGCTTGAAAGTGATGGTAAAGTGACTCGTCCTGCTC
TTGGAATCCAAATGGTCAATCTGTCTAACGTTGGAGCTAATGATCTTAGAAAACTAAATATTCCAAGTGGCCTCACTTCA
GGTGTAGTTGTTCGATCTGTTCAAAGTAATATGCCTGCAAATGGACATCTTCAAAAATACGATGTCATTACTAAAGTTGA
CGAAAAAGAGATTACTTCATCAACAGACTTACAACATGCTCTTTACAACCATGCTATTGGAGACACTATAAAAATAACCT
ATTACCGTAATGGTAAGGAGGAAACAACCTCTATAAAACTAGATAAGAATTCTGGTGATTTGGAACATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A1X0WM35

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mitis NCTC 12261

83.544

99.747

0.833

  htrA Streptococcus pneumoniae Rx1

82.785

99.747

0.826

  htrA Streptococcus pneumoniae D39

82.785

99.747

0.826

  htrA Streptococcus pneumoniae R6

82.785

99.747

0.826

  htrA Streptococcus pneumoniae TIGR4

82.785

99.747

0.826

  htrA Streptococcus gordonii str. Challis substr. CH1

64.824

100

0.652

  htrA Streptococcus mutans UA159

54.271

100

0.545