Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   M9H69_RS10340 Genome accession   NZ_CP097843
Coordinates   2062178..2062936 (+) Length   252 a.a.
NCBI ID   WP_250315580.1    Uniprot ID   -
Organism   Streptococcus oralis strain HP01     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2057178..2067936
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M9H69_RS10310 (M9H69_10310) comE 2057770..2058522 (-) 753 WP_250315577.1 competence system response regulator transcription factor ComE Regulator
  M9H69_RS10315 (M9H69_10315) comD 2058519..2059838 (-) 1320 WP_250315578.1 competence system sensor histidine kinase ComD Regulator
  M9H69_RS10320 (M9H69_10320) comC/comC2 2059859..2059984 (-) 126 WP_195215739.1 competence-stimulating peptide ComC Regulator
  M9H69_RS10330 (M9H69_10330) rlmH 2060266..2060745 (-) 480 WP_250315579.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  M9H69_RS10335 (M9H69_10335) htrA 2060930..2062120 (+) 1191 WP_084911880.1 S1C family serine protease Regulator
  M9H69_RS10340 (M9H69_10340) spo0J 2062178..2062936 (+) 759 WP_250315580.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 252 a.a.        Molecular weight: 29067.52 Da        Isoelectric Point: 7.3969

>NTDB_id=692965 M9H69_RS10340 WP_250315580.1 2062178..2062936(+) (spo0J) [Streptococcus oralis strain HP01]
MEKFEMISISEIQKNPYQPRKEFDVEKLKELAQSIKENGLIQPIIVRQSPVIGYEILAGERRYRASLLAGLTSIPAVVKH
LSDQEMMVQSIIENLQRENLNPVEEARAYDSLVEKGFTHTEIADKMGKSRPYITNFIRLLSLPEYILDEVENGKISQAHA
RSLVGLDKEQQDYFFQLIKNEDISVRKLEALLTEKKHKKQKKSDSFIKDEEDKLKKLLGLSVEIKLSKKDTGKIIISFSS
QEEYDRIINSLK

Nucleotide


Download         Length: 759 bp        

>NTDB_id=692965 M9H69_RS10340 WP_250315580.1 2062178..2062936(+) (spo0J) [Streptococcus oralis strain HP01]
ATGGAAAAATTTGAAATGATTTCTATCTCTGAAATACAAAAAAATCCTTACCAACCTCGGAAAGAATTTGATGTAGAAAA
ATTAAAAGAATTAGCTCAGTCAATCAAAGAAAATGGGCTCATCCAACCAATCATCGTTCGTCAATCTCCTGTAATTGGTT
ATGAAATCCTTGCAGGAGAGAGACGATATCGAGCTTCTCTCTTGGCTGGTCTGACCTCTATTCCAGCCGTTGTGAAACAC
CTCTCAGATCAAGAAATGATGGTTCAATCAATCATTGAAAATTTGCAGAGAGAAAACTTAAATCCTGTTGAAGAAGCACG
CGCCTATGACTCTCTAGTAGAAAAAGGATTTACTCACACTGAGATAGCCGATAAAATGGGGAAATCTCGACCTTATATCA
CTAATTTTATTCGTTTGCTTTCATTACCAGAATATATCTTAGATGAAGTAGAAAATGGAAAAATTTCTCAAGCTCATGCC
CGTTCACTAGTTGGTTTGGACAAAGAGCAACAAGACTATTTCTTCCAACTAATCAAAAATGAAGACATCTCTGTGAGAAA
GTTAGAAGCGCTTCTTACAGAGAAAAAACACAAGAAGCAAAAAAAAAGTGATTCTTTCATCAAAGACGAAGAAGATAAAT
TAAAAAAACTACTCGGTTTAAGTGTAGAAATTAAACTTTCAAAAAAAGATACTGGAAAGATTATTATCTCCTTTTCAAGT
CAAGAAGAATACGATAGAATTATTAACAGCCTGAAATAA

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(145-192)

ParB/Sulfiredoxin domain (ParB_N)

(6-94)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

50.593

100

0.508