Detailed information NTG0692093

Bioinformatically predicted

Overview

• Name: cinA
• Type: Machinery gene
• Locus tag: MF628_RS01775
• Genome accession: NZ_CP097767
• Coordinates: 435766..437034 (-)
• Length: 422 a.a.
• NCBI ID: WP_250272076.1
• Uniprot ID: -
• Organism: Paenibacillus polymyxa strain R 5.31
• Function: facilitate localization of RecA (predicted from homology) Homologous recombination

Genomic Context

Location: 430766..442034

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MF628_RS01760 (MF628_000352)	rny	431601..433145 (-)	1545	WP_013309958.1	ribonuclease Y	-
MF628_RS01765 (MF628_000353)	-	433520..434269 (-)	750	WP_250272075.1	regulatory protein RecX	-
MF628_RS01770 (MF628_000354)	recA	434465..435526 (-)	1062	WP_220028091.1	recombinase RecA	Machinery gene
MF628_RS01775 (MF628_000355)	cinA	435766..437034 (-)	1269	WP_250272076.1	competence/damage-inducible protein A	Machinery gene
MF628_RS01780 (MF628_000356)	pgsA	437130..437717 (-)	588	WP_013309954.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
MF628_RS01785 (MF628_000357)	-	437928..438419 (-)	492	WP_025722076.1	YajQ family cyclic di-GMP-binding protein	-
MF628_RS01790 (MF628_000358)	-	438564..438728 (-)	165	WP_023988236.1	hypothetical protein	-
MF628_RS01795 (MF628_000359)	-	438813..439877 (-)	1065	WP_250272077.1	helix-turn-helix domain-containing protein	-
MF628_RS01800 (MF628_000360)	-	439908..440681 (-)	774	WP_013370747.1	DUF3388 domain-containing protein	-
MF628_RS01805 (MF628_000361)	-	440909..441163 (-)	255	WP_013309950.1	DUF3243 domain-containing protein	-
MF628_RS01810 (MF628_000362)	ymfI	441266..442033 (-)	768	WP_250272078.1	elongation factor P 5-aminopentanone reductase	-

Sequence

Protein

• Length: 422 a.a.
• Molecular weight: 46343.31 Da
• Isoelectric Point: 4.8830

>NTDB_id=692093 MF628_RS01775 WP_250272076.1 435766..437034(-) (cinA) [Paenibacillus polymyxa strain R 5.31]
MKAEIIAVGTELLLGQIVNTNAQYLSQELATIGIDVYFQTVVGDNIDRLQEAIRIAQKRADIILFSGGLGPTQDDLTKDA
IASVLGRKLHIDRLAMDKLDQFFRNRGVEMTENNRRQALSIEGATPLENETGLAVGDAIAQDGKFYVVLPGPPKELKPMF
ANQAKPWLLQQALSGEEMPIYSKMLKFAGIGESALETHLLDLIQSQTDPTIAPYAKEGEVTIRISTKAASESEALIKLTA
TEVEIQQRLSEYMYASQDVTLEKVIVDLMAKRGLTVSAAESCTGGMLMEHITSIPGSAVMFQGGIVCYSNEMKMKLLNVP
NDYLEGDHAPGAVSKEVALVLAEQARMIMDSDFGLSVTGVAGPGYSERKPVGLVYIGIAERDKETEVHELRLSGNRETIR
LRSVKAILYRLWRRLVENEKLS

Nucleotide

• Length: 1269 bp

>NTDB_id=692093 MF628_RS01775 WP_250272076.1 435766..437034(-) (cinA) [Paenibacillus polymyxa strain R 5.31]
ATGAAAGCTGAAATAATTGCAGTAGGTACAGAGTTATTGCTCGGACAAATAGTGAATACAAATGCTCAATATTTGTCACA
AGAGTTGGCTACAATTGGAATCGATGTATATTTTCAGACTGTAGTTGGCGATAACATAGATCGGCTTCAGGAAGCAATAA
GAATTGCTCAGAAGCGTGCGGATATTATTTTGTTTTCCGGCGGTCTGGGACCGACTCAGGATGATTTGACGAAAGATGCG
ATAGCGTCTGTATTGGGACGAAAATTGCACATAGATCGTCTTGCAATGGATAAGCTAGATCAGTTTTTCCGTAACCGTGG
GGTAGAAATGACCGAGAATAACCGTCGGCAGGCGCTTTCTATTGAAGGCGCTACTCCGCTTGAAAATGAGACAGGGCTAG
CTGTGGGCGACGCAATTGCACAGGACGGTAAATTTTATGTAGTTTTGCCTGGACCGCCTAAGGAACTCAAACCCATGTTT
GCAAACCAGGCGAAACCTTGGTTGCTTCAGCAGGCATTGAGCGGTGAGGAAATGCCAATTTATTCAAAAATGCTAAAATT
TGCAGGGATCGGTGAGTCAGCTCTTGAAACCCATTTGTTAGATCTGATTCAATCCCAGACAGACCCTACTATTGCTCCTT
ATGCCAAGGAAGGGGAAGTCACGATCCGTATATCCACCAAGGCGGCCAGCGAAAGTGAAGCATTAATTAAGCTGACGGCT
ACAGAAGTAGAAATTCAGCAGCGCCTTTCCGAATATATGTATGCAAGCCAGGATGTTACGCTGGAGAAGGTTATCGTAGA
TCTAATGGCCAAACGCGGACTCACTGTGAGTGCGGCAGAAAGTTGTACAGGTGGAATGCTGATGGAACACATCACTTCCA
TACCGGGCAGTGCTGTTATGTTTCAAGGTGGCATCGTGTGTTATTCCAATGAAATGAAGATGAAATTGCTCAACGTGCCT
AATGATTATTTGGAAGGGGATCATGCGCCAGGCGCAGTGAGTAAGGAAGTAGCCCTTGTGCTTGCAGAGCAGGCGAGAAT
GATCATGGACAGCGATTTTGGACTTTCAGTTACTGGTGTAGCTGGGCCCGGGTATTCGGAACGGAAGCCAGTTGGTCTGG
TGTATATTGGCATTGCTGAGCGCGACAAAGAAACGGAAGTACATGAGCTGAGACTGAGTGGTAACCGTGAAACAATCCGA
CTGCGATCAGTCAAAGCAATTCTGTACAGATTGTGGCGCAGACTGGTAGAGAACGAGAAACTCTCTTAA

Domains

Predicted by InterproScan.

• Damage-inducible protein CinA KH domain (CinA_KH) (182-255)

• Probable molybdopterin binding domain (MoCF_biosynth) (5-168)

• Competence-damaged protein (CinA) (260-414)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cinA	Streptococcus mitis SK321	50	97.156	0.486
cinA	Streptococcus pneumoniae TIGR4	49.756	97.156	0.483
cinA	Streptococcus mitis NCTC 12261	49.512	97.156	0.481
cinA	Streptococcus pneumoniae Rx1	49.512	97.156	0.481
cinA	Streptococcus pneumoniae R6	49.512	97.156	0.481
cinA	Streptococcus pneumoniae D39	49.268	97.156	0.479
cinA	Bacillus subtilis subsp. subtilis str. 168	48.762	95.735	0.467
cinA	Streptococcus mutans UA159	45.412	100	0.457
cinA	Streptococcus suis isolate S10	44.819	91.469	0.41