Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | OSZ60_RS14635 | Genome accession | NZ_CP113230 |
| Coordinates | 3059989..3060453 (+) | Length | 154 a.a. |
| NCBI ID | WP_003122079.1 | Uniprot ID | P17836 |
| Organism | Pseudomonas aeruginosa strain BIAI 160 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3054989..3065453
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OSZ60_RS14610 (OSZ60_14610) | yacG | 3055159..3055359 (-) | 201 | WP_003094656.1 | DNA gyrase inhibitor YacG | - |
| OSZ60_RS14615 (OSZ60_14615) | coaE | 3055356..3055967 (-) | 612 | WP_003112838.1 | dephospho-CoA kinase | - |
| OSZ60_RS14620 (OSZ60_14620) | pilD | 3055964..3056836 (-) | 873 | WP_003107301.1 | type IV prepilin peptidase/methyltransferase PilD | Machinery gene |
| OSZ60_RS14625 (OSZ60_14625) | pilC | 3056837..3058054 (-) | 1218 | WP_003107299.1 | type II secretion system F family protein | Machinery gene |
| OSZ60_RS14630 (OSZ60_14630) | pilB | 3058058..3059758 (-) | 1701 | WP_003122078.1 | type IV-A pilus assembly ATPase PilB | Machinery gene |
| OSZ60_RS14635 (OSZ60_14635) | pilA | 3059989..3060453 (+) | 465 | WP_003122079.1 | pilin | Machinery gene |
| OSZ60_RS14640 (OSZ60_14640) | - | 3060529..3061914 (+) | 1386 | WP_003122080.1 | O-antigen ligase family protein | - |
| OSZ60_RS14650 (OSZ60_14650) | nadC | 3062095..3062943 (-) | 849 | WP_016562338.1 | carboxylating nicotinate-nucleotide diphosphorylase | - |
Sequence
Protein
Download Length: 154 a.a. Molecular weight: 16277.67 Da Isoelectric Point: 8.9987
>NTDB_id=689913 OSZ60_RS14635 WP_003122079.1 3059989..3060453(+) (pilA) [Pseudomonas aeruginosa strain BIAI 160]
MKAQKGFTLIELMIVVAIIGILAAIAIPQYQDYTARTQVTRAVSEVSALKTAAESAILEGKEIVSSATPKDTQYDIGFTE
STLLDGSGKSQIQVTDNKDGTVELVATLGKSSGSAIKGAVITVSRKNDGVWNCKITKTPTAWKPNYAPANCPKS
MKAQKGFTLIELMIVVAIIGILAAIAIPQYQDYTARTQVTRAVSEVSALKTAAESAILEGKEIVSSATPKDTQYDIGFTE
STLLDGSGKSQIQVTDNKDGTVELVATLGKSSGSAIKGAVITVSRKNDGVWNCKITKTPTAWKPNYAPANCPKS
Nucleotide
Download Length: 465 bp
>NTDB_id=689913 OSZ60_RS14635 WP_003122079.1 3059989..3060453(+) (pilA) [Pseudomonas aeruginosa strain BIAI 160]
ATGAAAGCTCAGAAGGGTTTTACTCTGATCGAACTGATGATCGTGGTTGCGATCATCGGCATCCTGGCCGCCATTGCCAT
CCCGCAATACCAGGACTACACCGCCCGTACCCAGGTGACCCGTGCCGTGAGTGAAGTCAGCGCGCTGAAGACCGCTGCGG
AGTCGGCGATTCTGGAAGGGAAGGAGATTGTTTCCAGCGCGACTCCTAAAGATACCCAGTATGACATTGGCTTCACCGAG
TCTACTTTGCTAGATGGTTCTGGTAAGAGTCAGATCCAGGTAACGGACAATAAAGATGGCACCGTTGAGTTGGTCGCTAC
CTTGGGTAAATCTTCTGGTTCCGCTATCAAAGGGGCTGTAATCACTGTTTCGCGTAAAAATGACGGAGTCTGGAACTGCA
AAATCACCAAAACTCCTACAGCTTGGAAGCCCAACTACGCTCCGGCTAATTGCCCGAAATCCTAA
ATGAAAGCTCAGAAGGGTTTTACTCTGATCGAACTGATGATCGTGGTTGCGATCATCGGCATCCTGGCCGCCATTGCCAT
CCCGCAATACCAGGACTACACCGCCCGTACCCAGGTGACCCGTGCCGTGAGTGAAGTCAGCGCGCTGAAGACCGCTGCGG
AGTCGGCGATTCTGGAAGGGAAGGAGATTGTTTCCAGCGCGACTCCTAAAGATACCCAGTATGACATTGGCTTCACCGAG
TCTACTTTGCTAGATGGTTCTGGTAAGAGTCAGATCCAGGTAACGGACAATAAAGATGGCACCGTTGAGTTGGTCGCTAC
CTTGGGTAAATCTTCTGGTTCCGCTATCAAAGGGGCTGTAATCACTGTTTCGCGTAAAAATGACGGAGTCTGGAACTGCA
AAATCACCAAAACTCCTACAGCTTGGAAGCCCAACTACGCTCCGGCTAATTGCCCGAAATCCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Acinetobacter baumannii strain A118 |
44.737 |
98.701 |
0.442 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
44.444 |
99.351 |
0.442 |
| pilA | Pseudomonas aeruginosa PAK |
45.985 |
88.961 |
0.409 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
39.073 |
98.052 |
0.383 |
| pilA | Vibrio parahaemolyticus RIMD 2210633 |
37.255 |
99.351 |
0.37 |
| pilA2 | Legionella pneumophila str. Paris |
38 |
97.403 |
0.37 |
| pilA | Vibrio cholerae strain A1552 |
36.774 |
100 |
0.37 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
36.774 |
100 |
0.37 |
| pilA | Vibrio cholerae C6706 |
36.774 |
100 |
0.37 |