Detailed information NTG0679619

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: OKF33_RS05480
• Genome accession: NZ_CP109654
• Coordinates: 1068320..1069273 (+)
• Length: 317 a.a.
• NCBI ID: WP_264306018.1
• Uniprot ID: -
• Organism: Campylobacter coli strain 10-02932
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1063320..1074273

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OKF33_RS05450	-	1063524..1064438 (-)	915	WP_002794364.1	hypothetical protein	-
OKF33_RS05455	-	1064442..1065113 (-)	672	WP_002794362.1	acetyltransferase	-
OKF33_RS05460	-	1065110..1065505 (-)	396	WP_002794360.1	FdtA/QdtA family cupin domain-containing protein	-
OKF33_RS05465	rfbB	1065502..1066533 (-)	1032	WP_264306017.1	dTDP-glucose 4,6-dehydratase	-
OKF33_RS05470	rfbA	1066537..1067415 (-)	879	WP_002837567.1	glucose-1-phosphate thymidylyltransferase RfbA	-
OKF33_RS05475	-	1067425..1068261 (-)	837	WP_031263834.1	glycosyltransferase family 2 protein	-
OKF33_RS05480	waaF	1068320..1069273 (+)	954	WP_264306018.1	lipopolysaccharide heptosyltransferase II	Regulator
OKF33_RS05485	-	1069280..1069906 (-)	627	Protein_1054	glycosyltransferase family 25 protein	-
OKF33_RS05490	-	1070471..1071100 (+)	630	WP_002784646.1	S24 family peptidase	-
OKF33_RS05495	-	1071181..1071501 (+)	321	WP_002784647.1	hypothetical protein	-
OKF33_RS05500	-	1071511..1071705 (+)	195	WP_002784648.1	hypothetical protein	-
OKF33_RS05505	-	1071785..1072072 (+)	288	WP_002865289.1	hypothetical protein	-
OKF33_RS05510	-	1072100..1072915 (-)	816	WP_002870153.1	DNA adenine methylase	-
OKF33_RS05515	-	1073017..1073508 (-)	492	WP_264306020.1	phage virion morphogenesis protein	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 36442.10 Da
• Isoelectric Point: 10.2322

>NTDB_id=679619 OKF33_RS05480 WP_264306018.1 1068320..1069273(+) (waaF) [Campylobacter coli strain 10-02932]
MKIFIHLPTWLGDAVMASPALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGLNPGA
SFGSAKRWDVSYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGPTKFTQTSPWQNENAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPEIIIEVSKQLLFLN

Nucleotide

• Length: 954 bp

>NTDB_id=679619 OKF33_RS05480 WP_264306018.1 1068320..1069273(+) (waaF) [Campylobacter coli strain 10-02932]
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCACCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCCCAATTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGGTCTGCGTTTTCTTCTAAGATTATCTTGCATATTCTTAAAACGAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGTGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACTACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACATAAGTGCGGTTTATAAGGTAAAAACCGTGGCTATTTTTGGTCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAATGCAAAATTAGTACATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAACCAGAAATCATCATAGAAGTAAGTAAACAATTGCTATTTCTAAATTAA

Domains

Predicted by InterProScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (96-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	94.904	99.054	0.94