Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   MUG87_RS05645 Genome accession   NZ_CP095462
Coordinates   1085903..1087129 (-) Length   408 a.a.
NCBI ID   WP_247086357.1    Uniprot ID   -
Organism   Ectobacillus sp. JY-23     
Function   unknown (predicted from homology)   
Unclear

Genomic Context

Location: 1080903..1092129
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUG87_RS05625 (MUG87_05625) spoVS 1081427..1081687 (-) 261 WP_124563708.1 stage V sporulation protein SpoVS -
  MUG87_RS05630 (MUG87_05630) - 1081826..1082620 (-) 795 WP_247086351.1 TIGR00282 family metallophosphoesterase -
  MUG87_RS05635 (MUG87_05635) rny 1082792..1084354 (-) 1563 WP_247086353.1 ribonuclease Y -
  MUG87_RS05640 (MUG87_05640) recA 1084699..1085739 (-) 1041 WP_247086355.1 recombinase RecA Machinery gene
  MUG87_RS05645 (MUG87_05645) cinA 1085903..1087129 (-) 1227 WP_247086357.1 competence/damage-inducible protein A Machinery gene
  MUG87_RS05650 (MUG87_05650) pgsA 1087142..1087729 (-) 588 WP_247086359.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  MUG87_RS05655 (MUG87_05655) - 1087789..1088673 (-) 885 WP_247086361.1 RodZ domain-containing protein -
  MUG87_RS05660 (MUG87_05660) - 1088686..1089471 (-) 786 WP_247086363.1 DUF3388 domain-containing protein -
  MUG87_RS05665 (MUG87_05665) - 1089636..1089887 (-) 252 WP_124563700.1 DUF3243 domain-containing protein -
  MUG87_RS05670 (MUG87_05670) - 1089953..1090663 (-) 711 WP_247086365.1 SDR family oxidoreductase -
  MUG87_RS05675 (MUG87_05675) - 1090704..1091990 (-) 1287 WP_247086367.1 pitrilysin family protein -

Sequence

Protein


Download         Length: 408 a.a.        Molecular weight: 44163.89 Da        Isoelectric Point: 6.0650

>NTDB_id=676947 MUG87_RS05645 WP_247086357.1 1085903..1087129(-) (cinA) [Ectobacillus sp. JY-23]
MHAEIIAVGTELLLGQILNTNAKFLSQKLASIGVNVYFQTVVGDNAERLSSAIAVAQQRADVLIFTGGLGPTKDDLTKET
IANAAGVQLVYDKQAMDAITAYFARTGRTFTENNKKQALVLEGAVVFPNDFGMAPGMALATAGKLYVLLPGPPKEMIPMY
ERYVEPYLMRLGSRGNLYSRVLRFFGIGESQLEDVLQDIIDAQTNPTIAPLAAEGEVTLRLTAKATTEIEAHELLNKTEE
QILERVGSFFYGYNNESLHTKVIDLLKVKGYTLSCAESLTGGMFAAKITDVPGVSSCFKGGIQCYDRSVKEQLLGIPSNM
QVVSSQCAGLLAANVLTLLQSDVGISFTGVAGPEPLEHQTPGTVHIGVAIKGKQPETFSLKLGGNRTLVRERAVKYGLYY
LLKRLEEC

Nucleotide


Download         Length: 1227 bp        

>NTDB_id=676947 MUG87_RS05645 WP_247086357.1 1085903..1087129(-) (cinA) [Ectobacillus sp. JY-23]
GTGCACGCAGAAATTATTGCGGTTGGCACCGAATTATTATTGGGACAAATCTTAAATACAAATGCAAAGTTTCTTTCGCA
GAAATTAGCATCTATTGGTGTTAATGTTTATTTCCAAACTGTTGTAGGAGATAATGCTGAACGCCTTTCTTCAGCTATTG
CTGTTGCACAGCAACGAGCGGATGTTTTAATTTTTACGGGGGGATTAGGGCCAACAAAAGATGATTTAACAAAAGAAACT
ATCGCCAATGCTGCAGGAGTCCAACTGGTATATGATAAGCAGGCTATGGATGCAATTACTGCTTATTTCGCGAGAACTGG
GCGAACCTTTACAGAAAATAATAAAAAACAAGCACTTGTACTAGAAGGGGCGGTTGTCTTTCCAAATGATTTTGGTATGG
CGCCCGGTATGGCATTGGCTACAGCTGGTAAATTATATGTGCTGTTACCCGGACCGCCGAAAGAAATGATTCCTATGTAT
GAACGATACGTAGAACCATATCTAATGCGATTAGGTTCTAGAGGGAATTTGTACTCACGTGTATTACGTTTTTTTGGAAT
TGGTGAATCACAGCTAGAAGATGTATTACAAGATATTATTGATGCCCAAACCAATCCCACTATTGCCCCCCTTGCTGCTG
AAGGGGAAGTAACGCTTCGATTGACGGCTAAGGCTACAACTGAAATAGAAGCACATGAGCTACTGAATAAAACTGAGGAA
CAAATTTTAGAAAGAGTAGGGTCTTTTTTCTACGGTTATAATAATGAATCCCTGCATACTAAGGTTATTGATTTGCTAAA
GGTAAAAGGATATACGCTTTCGTGTGCAGAAAGTTTAACTGGTGGTATGTTTGCTGCTAAGATAACAGACGTACCAGGTG
TTTCCTCTTGCTTTAAAGGCGGCATACAATGCTACGATAGATCTGTAAAGGAACAGTTACTTGGTATTCCATCCAATATG
CAAGTAGTAAGTTCACAATGCGCAGGTTTACTTGCTGCAAATGTTCTTACGCTTTTGCAAAGTGATGTGGGAATCAGCTT
TACAGGTGTCGCAGGACCAGAACCATTAGAACATCAAACGCCTGGGACTGTTCATATTGGTGTAGCAATTAAAGGAAAGC
AACCTGAAACATTTTCACTAAAGCTCGGGGGTAATAGAACCCTTGTAAGAGAAAGAGCTGTCAAATATGGTTTATACTAT
CTATTAAAACGACTGGAAGAGTGTTGA

Domains

Predicted by InterproScan.

Probable molybdopterin binding domain (MoCF_biosynth)

(5-169)

Damage-inducible protein CinA KH domain (CinA_KH)

(179-252)

Competence-damaged protein (CinA)

(256-404)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

55.61

100

0.559
  cinA Streptococcus pneumoniae TIGR4

49.165

100

0.505
  cinA Streptococcus mitis SK321

49.165

100

0.505
  cinA Streptococcus pneumoniae Rx1

48.926

100

0.502
  cinA Streptococcus mitis NCTC 12261

48.926

100

0.502
  cinA Streptococcus pneumoniae R6

48.926

100

0.502
  cinA Streptococcus pneumoniae D39

48.687

100

0.5
  cinA Streptococcus mutans UA159

47.42

99.755

0.473
  cinA Streptococcus suis isolate S10

43.432

91.422

0.397