Detailed information NTG0067236

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: SITYG_RS01810
• Genome accession: NZ_AP014880
• Coordinates: 348027..348497 (+)
• Length: 156 a.a.
• NCBI ID: WP_003074535.1
• Uniprot ID: A0AAE8KBG2
• Organism: Streptococcus intermedius strain TYG1620
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 343027..353497

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SITYG_RS01775 (SITYG_03340)	-	343134..343943 (+)	810	WP_003074542.1	CDP-diacylglycerol diphosphatase	-
SITYG_RS01780 (SITYG_03350)	-	343933..344448 (+)	516	WP_009567964.1	thioredoxin domain-containing protein	-
SITYG_RS10515 (SITYG_03360)	-	344605..344850 (+)	246	WP_414930099.1	hypothetical protein	-
SITYG_RS10520	-	344909..345019 (+)	111	Protein_328	hydrolase	-
SITYG_RS01790 (SITYG_03370)	-	345100..345528 (-)	429	WP_096362532.1	hypothetical protein	-
SITYG_RS01795 (SITYG_03380)	-	345503..346408 (-)	906	WP_096362533.1	phosphodiester glycosidase family protein	-
SITYG_RS01800 (SITYG_03390)	-	346405..347448 (-)	1044	WP_101494439.1	bifunctional glycosyltransferase family 2/GtrA family protein	-
SITYG_RS01805 (SITYG_03400)	rpsF	347725..348015 (+)	291	WP_003074536.1	30S ribosomal protein S6	-
SITYG_RS01810 (SITYG_03410)	ssbA	348027..348497 (+)	471	WP_003074535.1	single-stranded DNA-binding protein	Machinery gene
SITYG_RS01815 (SITYG_03420)	rpsR	348534..348773 (+)	240	WP_000068664.1	30S ribosomal protein S18	-
SITYG_RS01820 (SITYG_03430)	-	349182..349691 (+)	510	WP_096362534.1	GNAT family N-acetyltransferase	-
SITYG_RS01825 (SITYG_03440)	-	349843..350520 (-)	678	WP_003074532.1	DUF1129 domain-containing protein	-
SITYG_RS01830 (SITYG_03450)	-	350536..351480 (-)	945	WP_003070861.1	magnesium transporter CorA family protein	-

Sequence

Protein

• Length: 156 a.a.
• Molecular weight: 17465.18 Da
• Isoelectric Point: 4.9008

>NTDB_id=67236 SITYG_RS01810 WP_003074535.1 348027..348497(+) (ssbA) [Streptococcus intermedius strain TYG1620]
MINNVVLVGRMTRDAELRYTPQNQAVATFTLAVNRNFKNQSGEREADFINVVIWRQQAENLANWAKKGALIGVTGRIQTR
NYENQQGQRVYVTEVVADNFQLLESRASREGQSSGGYTSNNFGSSPSANQVPNFSRDENPFGNTNPMDISDDDLPF

Nucleotide

• Length: 471 bp

>NTDB_id=67236 SITYG_RS01810 WP_003074535.1 348027..348497(+) (ssbA) [Streptococcus intermedius strain TYG1620]
ATGATAAATAACGTTGTACTTGTGGGTCGGATGACCCGAGATGCCGAACTTCGCTATACGCCGCAAAATCAAGCGGTCGC
AACTTTTACTCTTGCTGTTAATCGCAACTTTAAAAATCAAAGTGGCGAGAGAGAAGCAGATTTTATTAACGTTGTAATTT
GGCGCCAACAGGCAGAAAATCTTGCAAATTGGGCTAAAAAAGGAGCTCTTATCGGAGTTACTGGTCGCATTCAGACACGT
AACTACGAAAATCAGCAAGGTCAACGTGTCTATGTGACAGAAGTCGTAGCGGATAATTTCCAGTTATTGGAAAGTCGCGC
TAGTCGTGAAGGTCAATCTTCTGGCGGCTATACTTCTAACAATTTTGGAAGTTCACCTTCTGCCAACCAAGTACCCAACT
TTTCTCGTGATGAAAATCCATTTGGGAATACCAATCCAATGGACATCTCAGATGACGATCTACCATTTTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (2-103)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Bacillus subtilis subsp. subtilis str. 168	59.195	100	0.66
ssb	Latilactobacillus sakei subsp. sakei 23K	56.571	100	0.635
ssbB	Bacillus subtilis subsp. subtilis str. 168	57.547	67.949	0.391
ssbB	Streptococcus sobrinus strain NIDR 6715-7	55.046	69.872	0.385
ssbB/cilA	Streptococcus pneumoniae TIGR4	54.128	69.872	0.378
ssbB/cilA	Streptococcus mitis SK321	53.211	69.872	0.372
ssbB/cilA	Streptococcus mitis NCTC 12261	53.211	69.872	0.372
ssbB/cilA	Streptococcus pneumoniae Rx1	53.211	69.872	0.372
ssbB/cilA	Streptococcus pneumoniae D39	53.211	69.872	0.372
ssbB/cilA	Streptococcus pneumoniae R6	53.211	69.872	0.372