NTDB

Overview

Name	comGC	Type	Machinery gene
Locus tag	MUA19_RS06155	Genome accession	NZ_CP094741
Coordinates	1272690..1273007 (+)	Length	105 a.a.
NCBI ID	WP_037573894.1	Uniprot ID	A0AAE5W8Q2
Organism	Staphylococcus chromogenes strain IVB6200
Function	dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1267690..1278007

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MUA19_RS06125 (MUA19_06105)	-	1268477..1268680 (+)	204	WP_037573910.1	YqgQ family protein	-
MUA19_RS06130 (MUA19_06110)	-	1268677..1269663 (+)	987	WP_105985492.1	ROK family glucokinase	-
MUA19_RS06135 (MUA19_06115)	-	1269664..1269975 (+)	312	WP_262616285.1	MTH1187 family thiamine-binding protein	-
MUA19_RS06140 (MUA19_06120)	-	1269989..1270612 (+)	624	WP_105985494.1	MBL fold metallo-hydrolase	-
MUA19_RS06145 (MUA19_06125)	comGA	1270665..1271639 (+)	975	WP_105985495.1	competence type IV pilus ATPase ComGA	Machinery gene
MUA19_RS06150 (MUA19_06130)	comGB	1271647..1272675 (+)	1029	WP_262617526.1	competence type IV pilus assembly protein ComGB	-
MUA19_RS06155 (MUA19_06135)	comGC	1272690..1273007 (+)	318	WP_037573894.1	competence type IV pilus major pilin ComGC	Machinery gene
MUA19_RS06160 (MUA19_06140)	comGD	1272961..1273428 (+)	468	WP_232195600.1	competence type IV pilus minor pilin ComGD	-
MUA19_RS06165 (MUA19_06145)	-	1273621..1274028 (+)	408	WP_262616286.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	-
MUA19_RS06170 (MUA19_06150)	tnpA	1274141..1274568 (-)	428	Protein_1179	IS200/IS605 family transposase	-
MUA19_RS06175 (MUA19_06155)	-	1275031..1275555 (+)	525	WP_105985500.1	shikimate kinase	-
MUA19_RS06180 (MUA19_06160)	gcvT	1275708..1276799 (+)	1092	WP_105985501.1	glycine cleavage system aminomethyltransferase GcvT	-

Sequence

Protein

Download Length: 105 a.a. Molecular weight: 11801.05 Da Isoelectric Point: 9.5646

                                >NTDB_id=671731 MUA19_RS06155 WP_037573894.1 1272690..1273007(+) (comGC) [Staphylococcus chromogenes strain IVB6200]

MKLFKKLKENKGFTLIEMLLVLLIISVLLILIIPNIAKQSEHIQKTGCSAQLKLVESQIEAYTLKFNRKPSTIDELVQEG

YIKENQKSCKNGDTIILRGGEAVVS

Nucleotide

Download Length: 318 bp

                                >NTDB_id=671731 MUA19_RS06155 WP_037573894.1 1272690..1273007(+) (comGC) [Staphylococcus chromogenes strain IVB6200]

ATGAAATTATTTAAAAAATTAAAAGAAAACAAGGGGTTTACGTTAATTGAAATGCTTTTAGTTTTATTAATTATAAGTGT

GCTTTTAATACTAATTATCCCTAATATAGCTAAACAATCAGAACATATTCAAAAAACAGGTTGTTCAGCACAACTTAAAT

TAGTCGAAAGTCAAATTGAAGCGTATACTTTAAAATTTAATCGAAAACCTTCAACAATCGACGAACTTGTTCAAGAAGGA

TATATCAAAGAAAATCAAAAATCATGCAAAAATGGAGACACCATTATATTACGTGGCGGGGAAGCCGTTGTTTCATAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(10-32)

Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.

3D structure

Source	ID	Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.

Visualization of predicted probability:

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	H_a-value
comGC	Staphylococcus aureus N315	66.99	98.095	0.657
comGC	Staphylococcus aureus MW2	66.99	98.095	0.657
comYC	Streptococcus gordonii str. Challis substr. CH1	50	81.905	0.41
comGC	Bacillus subtilis subsp. subtilis str. 168	44.681	89.524	0.4
comGC/cglC	Streptococcus pneumoniae R6	47.674	81.905	0.39
comGC/cglC	Streptococcus pneumoniae TIGR4	47.674	81.905	0.39
comGC/cglC	Streptococcus pneumoniae Rx1	47.674	81.905	0.39
comGC/cglC	Streptococcus pneumoniae D39	47.674	81.905	0.39
comGC/cglC	Streptococcus mitis SK321	49.383	77.143	0.381
comYC	Streptococcus mutans UA140	51.948	73.333	0.381
comYC	Streptococcus mutans UA159	51.948	73.333	0.381
comYC	Streptococcus suis isolate S10	51.316	72.381	0.371
comGC/cglC	Streptococcus mitis NCTC 12261	51.316	72.381	0.371

Detailed information NTG0671731