Detailed information NTG0670139

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: MST17_RS07620
• Genome accession: NZ_CP094545
• Coordinates: 1520937..1522127 (+)
• Length: 396 a.a.
• NCBI ID: WP_078190956.1
• Uniprot ID: -
• Organism: Acinetobacter sp. YH16056_T
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1515937..1527127

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MST17_RS07605 (MST17_07590)	-	1516003..1517172 (+)	1170	WP_180027115.1	acyl-CoA desaturase	-
MST17_RS07610 (MST17_07595)	-	1517295..1518878 (-)	1584	WP_180027116.1	ATP-binding cassette domain-containing protein	-
MST17_RS07615 (MST17_07600)	-	1519581..1520666 (+)	1086	WP_180027117.1	3-deoxy-7-phosphoheptulonate synthase	-
MST17_RS07620 (MST17_07605)	pilU	1520937..1522127 (+)	1191	WP_078190956.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
MST17_RS07625 (MST17_07610)	gcvH	1522225..1522599 (-)	375	WP_180027118.1	glycine cleavage system protein GcvH	-
MST17_RS07630 (MST17_07615)	-	1522672..1523700 (-)	1029	WP_078190954.1	AraC family transcriptional regulator	-
MST17_RS07635 (MST17_07620)	-	1523851..1524300 (-)	450	WP_180027119.1	MaoC family dehydratase	-
MST17_RS07640 (MST17_07625)	-	1524278..1526152 (-)	1875	WP_180027120.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 396 a.a.
• Molecular weight: 44742.09 Da
• Isoelectric Point: 6.2796

>NTDB_id=670139 MST17_RS07620 WP_078190956.1 1520937..1522127(+) (pilU) [Acinetobacter sp. YH16056_T]
MYTAELLEEARRFMFHMLTKVVEYGGSDLFITADFPPSIKHQGMMKPFGQQELDAEKTKLFAYSLMNEKQRKEFETELEC
NFAISVPNVSRFRVNVFQQQLHVGMVIRTITAEIPNFEKLKLPASLKHVIMEKRGLVLVVGGTGSGKSTSLAALIDYRNE
NSAGHIITVEDPVEYVHKHKKSMITHREVGVDSHSWHNALKNTLRQAPDVILIGEIRDTETMEHAIAFAETGHLCLGTLH
SNNANQTLDRIINFFPEERRNQLLMDLSSNMKAIVSQRLIRTEDGKGRRAAVEIMLNTPLISDLILKGEFHELKAIMAKS
RELGMQTFDQALFDLYNDGAISYEEALRNADSTNELRLQIKLKSSRANGTSAAAQSFSMVEEKKEEPESTEASEEI

Nucleotide

• Length: 1191 bp

>NTDB_id=670139 MST17_RS07620 WP_078190956.1 1520937..1522127(+) (pilU) [Acinetobacter sp. YH16056_T]
ATGTACACTGCTGAATTGCTGGAAGAAGCACGCCGTTTTATGTTCCACATGTTAACCAAAGTGGTTGAATATGGTGGTTC
TGATTTATTTATTACGGCAGATTTTCCACCAAGTATTAAACATCAAGGCATGATGAAACCCTTTGGACAGCAAGAACTTG
ATGCTGAGAAAACAAAGCTTTTCGCCTATAGTTTGATGAATGAGAAGCAGCGCAAAGAGTTTGAAACAGAACTAGAATGT
AACTTTGCGATTAGTGTGCCAAACGTTTCGCGTTTTCGTGTCAATGTATTTCAGCAACAGTTACATGTGGGTATGGTCAT
TCGTACCATTACGGCAGAAATTCCAAATTTTGAAAAGCTTAAATTACCGGCTTCGCTTAAGCACGTGATTATGGAAAAAC
GTGGTTTAGTTTTAGTGGTTGGAGGTACAGGTTCAGGAAAATCAACCTCTTTAGCGGCGCTGATTGATTATCGAAATGAA
AACAGCGCAGGGCATATCATCACTGTTGAAGACCCAGTGGAATATGTGCATAAGCATAAAAAATCAATGATTACGCATCG
TGAAGTCGGTGTAGACAGTCATTCGTGGCATAACGCTTTAAAAAATACCTTGCGACAAGCACCAGACGTGATTTTAATTG
GTGAAATTCGTGACACCGAGACTATGGAACATGCAATTGCCTTTGCTGAAACAGGACATTTATGTTTAGGTACGCTACAT
TCAAATAACGCCAATCAAACCCTAGATCGAATCATTAACTTCTTCCCAGAAGAGCGAAGAAATCAATTGCTTATGGATTT
ATCGAGCAATATGAAAGCGATTGTTTCTCAGCGATTAATCCGGACTGAAGATGGTAAAGGACGCCGTGCAGCCGTTGAAA
TTATGTTAAATACGCCGCTCATTTCAGATTTGATTTTGAAAGGTGAGTTTCATGAACTAAAAGCGATTATGGCAAAATCT
CGTGAACTTGGGATGCAAACTTTCGACCAAGCTTTATTTGATTTATATAATGACGGCGCTATTTCTTATGAAGAAGCTTT
AAGAAATGCCGATTCAACTAATGAATTACGTTTGCAAATTAAACTGAAAAGTTCACGTGCAAATGGTACTTCAGCGGCTG
CGCAATCTTTTAGTATGGTTGAAGAAAAGAAAGAAGAACCTGAAAGTACCGAAGCTTCGGAAGAAATATAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (117-282)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	61.207	87.879	0.538
pilU	Acinetobacter baylyi ADP1	54.62	92.929	0.508
pilU	Vibrio cholerae strain A1552	51.099	91.919	0.47
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	39.523	95.202	0.376
pilT	Acinetobacter nosocomialis M2	43.333	83.333	0.361
pilT	Acinetobacter baumannii D1279779	43.333	83.333	0.361
pilT	Acinetobacter baumannii strain A118	43.333	83.333	0.361
pilT	Legionella pneumophila strain Lp02	43.333	83.333	0.361
pilT	Legionella pneumophila strain ERS1305867	43.333	83.333	0.361