Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Machinery gene
Locus tag   MON40_RS02430 Genome accession   NZ_CP094241
Coordinates   518390..519631 (-) Length   413 a.a.
NCBI ID   WP_039863289.1    Uniprot ID   -
Organism   Neisseria macacae ATCC 33926     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 513390..524631
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MON40_RS02400 (MON40_02400) - 514062..514928 (-) 867 WP_003757139.1 hypothetical protein -
  MON40_RS02405 (MON40_02405) - 514961..515812 (-) 852 WP_003757138.1 mechanosensitive ion channel family protein -
  MON40_RS02410 (MON40_02410) - 516116..516451 (+) 336 WP_003757137.1 hypothetical protein -
  MON40_RS02415 (MON40_02415) yacG 516654..516839 (-) 186 WP_003763805.1 DNA gyrase inhibitor YacG -
  MON40_RS02420 (MON40_02420) coaE 516894..517523 (-) 630 WP_003780213.1 dephospho-CoA kinase -
  MON40_RS02425 (MON40_02425) pilD 517525..518388 (-) 864 WP_003780212.1 A24 family peptidase Machinery gene
  MON40_RS02430 (MON40_02430) pilG 518390..519631 (-) 1242 WP_039863289.1 type II secretion system F family protein Machinery gene
  MON40_RS02435 (MON40_02435) pilF 519703..521382 (-) 1680 WP_003757129.1 type IV-A pilus assembly ATPase PilB Machinery gene
  MON40_RS02440 (MON40_02440) bamE 521907..522380 (-) 474 WP_003757128.1 outer membrane protein assembly factor BamE -
  MON40_RS02445 (MON40_02445) - 522445..523704 (-) 1260 WP_003780206.1 YadA-like family protein -

Sequence

Protein


Download         Length: 413 a.a.        Molecular weight: 45774.96 Da        Isoelectric Point: 9.9835

>NTDB_id=668299 MON40_RS02430 WP_039863289.1 518390..519631(-) (pilG) [Neisseria macacae ATCC 33926]
MAQAEQKRGLFAQKNKGKRFTFEGKNTNTDQLVRGEVVAKDEEEARKKLQRRGIRPLRISKVKATKKRRITQEDITVFTR
QLATMMKAGLPLMQAFEIVARGHSNPSMTEMLMQVRADVEQGSALGKSFAKYPKYFDRFYCNLIAAGEAGGVLESLLDKL
AVYKEKTQAIKKKVKTALTYPISIVVVAIALIFVMMRWVLPEFGKVYAGMGAELPGLTKIVMDISKIFVEYGWLMIVMVI
AICFGVYKLHEKSPNFQKRIDAMVLRLPIFGQIVRKATIARWARTTSTLFAAGVPLVEVLDSVAGAAGNILYEEATQDIR
AKVTQGLSLTSSMQSTDMFPNMVIQMAAIGEESGSLDDMLNKAAEFYEDEVDNSVAQLSSLMEPIIMVVLGSIIGTLLVA
MYLPLFNLGNVVG

Nucleotide


Download         Length: 1242 bp        

>NTDB_id=668299 MON40_RS02430 WP_039863289.1 518390..519631(-) (pilG) [Neisseria macacae ATCC 33926]
ATGGCTCAAGCAGAGCAAAAAAGAGGCTTATTCGCTCAAAAAAATAAAGGCAAACGTTTTACGTTTGAAGGTAAAAATAC
CAATACGGATCAATTAGTCCGAGGCGAAGTAGTCGCCAAAGACGAAGAAGAAGCGCGTAAAAAGCTCCAACGTCGCGGGA
TACGCCCTTTACGTATCAGTAAAGTAAAGGCAACTAAAAAGCGTCGTATTACTCAGGAAGACATTACTGTCTTTACCCGT
CAACTTGCCACCATGATGAAAGCAGGTCTGCCTTTAATGCAGGCTTTTGAAATTGTCGCACGCGGACACTCCAACCCATC
CATGACTGAAATGTTGATGCAAGTCCGTGCAGATGTGGAACAAGGTAGTGCATTAGGTAAATCATTTGCCAAATACCCAA
AATATTTCGACCGTTTTTATTGCAATCTGATTGCGGCCGGCGAAGCTGGCGGTGTTTTGGAAAGCCTGTTGGATAAACTT
GCTGTATATAAAGAGAAAACGCAAGCCATTAAGAAAAAAGTGAAAACTGCGCTGACGTACCCAATTTCTATTGTTGTTGT
TGCAATAGCATTGATCTTCGTAATGATGCGTTGGGTATTACCTGAATTTGGTAAAGTTTATGCTGGAATGGGTGCTGAAT
TGCCTGGTTTAACCAAAATTGTTATGGATATTTCCAAAATATTCGTGGAATATGGGTGGCTGATGATTGTTATGGTTATT
GCCATTTGTTTTGGTGTTTATAAACTACATGAAAAATCACCAAATTTCCAGAAACGTATAGATGCGATGGTTTTACGTTT
ACCAATTTTTGGTCAAATTGTCCGTAAAGCAACTATTGCTCGCTGGGCTCGTACCACTTCCACCTTGTTTGCAGCAGGCG
TACCTTTGGTAGAAGTTTTAGATTCAGTAGCAGGTGCAGCCGGTAATATCCTTTATGAGGAGGCAACACAGGACATTCGT
GCGAAAGTTACTCAAGGTCTTTCTTTGACTTCGAGTATGCAAAGTACGGATATGTTCCCCAATATGGTTATTCAAATGGC
CGCTATTGGTGAAGAATCCGGTTCCCTTGATGATATGCTGAATAAAGCTGCAGAGTTTTACGAGGATGAAGTTGATAACT
CTGTAGCACAATTATCCTCACTGATGGAGCCCATCATTATGGTAGTTTTAGGCTCCATCATCGGAACATTGTTGGTAGCA
ATGTATCTGCCGCTGTTTAACCTCGGTAACGTAGTAGGTTAA

Domains

Predicted by InterproScan.

Type II secretion system (T2SS), protein F (T2SSF)

(78-201)

Type II secretion system (T2SS), protein F (T2SSF)

(282-404)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Neisseria meningitidis 44/76-A

70.69

98.305

0.695
  pilG Neisseria gonorrhoeae MS11

70.968

97.579

0.692
  pilC Legionella pneumophila strain ERS1305867

45.679

98.063

0.448
  pilC Acinetobacter baumannii D1279779

45.226

96.368

0.436
  pilC Pseudomonas stutzeri DSM 10701

43.951

98.063

0.431
  pilC Acinetobacter baylyi ADP1

44.472

96.368

0.429
  pilC Vibrio cholerae strain A1552

38.5

96.852

0.373
  pilC Vibrio campbellii strain DS40M4

37.25

96.852

0.361

Multiple sequence alignment