Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   MP387_RS09120 Genome accession   NZ_CP094226
Coordinates   1874512..1875705 (+) Length   397 a.a.
NCBI ID   WP_242746621.1    Uniprot ID   -
Organism   Streptococcus oralis strain 1648     
Function   repress competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1869512..1880705
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MP387_RS09080 (MP387_09080) - 1870571..1871113 (+) 543 WP_000665080.1 TetR-like C-terminal domain-containing protein -
  MP387_RS09095 (MP387_09095) comE 1871351..1872103 (-) 753 WP_000866079.1 competence system response regulator transcription factor ComE Regulator
  MP387_RS09100 (MP387_09100) comD 1872100..1873419 (-) 1320 WP_242746613.1 competence system sensor histidine kinase ComD Regulator
  MP387_RS09105 (MP387_09105) comC/comC1 1873440..1873565 (-) 126 WP_008282505.1 competence-stimulating peptide ComC Regulator
  MP387_RS09115 (MP387_09115) rlmH 1873847..1874326 (-) 480 WP_242746617.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  MP387_RS09120 (MP387_09120) htrA 1874512..1875705 (+) 1194 WP_242746621.1 S1C family serine protease Regulator
  MP387_RS09125 (MP387_09125) spo0J 1875763..1876521 (+) 759 WP_242746624.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 397 a.a.        Molecular weight: 41938.75 Da        Isoelectric Point: 6.3586

>NTDB_id=668138 MP387_RS09120 WP_242746621.1 1874512..1875705(+) (htrA) [Streptococcus oralis strain 1648]
MKHLQKFYKKGVKVLVIILIGFLSGALGSFVTLQLYQKQGNQATNNNSGTVTQTSYKNENSTTQAVNKVKDAVVSIITYS
SNSRQSSVFNADETNSDSDNQQIASEGSGVIYKKDDKDAYLVTNTHVINGASKVDIRLADGTKVPGEIVGSDTFSDIAVV
KISSEKVTTVAEFGDSSQLSVGETAIAIGSPLGSEYANTVTQGIISSLNRNVSLKSEDGQAISTKAIQTDTAINPGNSGG
PLVNIQGQVIGITSSKIASNGGTSVEGLGFAIPSNDAQNIIKQLESDGKVTRPALGIQMVNLSNVGASDLRKLNIPSGLT
SGVVVRSVQNNMPANGHLQKYDVITKVDDKEIASSTDLQHALYNHAIGDTIKVTYYRNGKEETTSIKLDKNSGDLES

Nucleotide


Download         Length: 1194 bp        

>NTDB_id=668138 MP387_RS09120 WP_242746621.1 1874512..1875705(+) (htrA) [Streptococcus oralis strain 1648]
ATGAAACACTTACAAAAATTTTACAAAAAAGGAGTTAAAGTTCTTGTAATCATTCTAATCGGATTTTTAAGTGGTGCCTT
AGGAAGTTTCGTAACATTACAACTTTATCAAAAACAAGGAAATCAAGCTACAAATAACAATTCTGGCACTGTCACTCAAA
CATCCTATAAGAATGAAAATTCAACCACTCAAGCAGTAAATAAAGTTAAGGATGCTGTTGTCTCAATCATTACTTATTCT
TCTAATAGTAGACAAAGTAGTGTATTTAATGCTGATGAAACTAATTCTGATTCAGACAATCAACAAATCGCAAGTGAGGG
ATCAGGTGTTATCTATAAAAAGGATGATAAAGATGCCTATCTTGTAACTAATACTCACGTTATCAATGGAGCTTCAAAAG
TTGATATCCGCTTAGCAGATGGTACTAAGGTTCCTGGTGAAATTGTCGGATCTGATACCTTCTCTGATATTGCTGTCGTT
AAAATTTCTTCAGAAAAAGTTACAACAGTAGCAGAATTTGGGGATTCAAGTCAACTTAGTGTTGGAGAAACAGCGATTGC
TATCGGTAGTCCTTTAGGTTCAGAATATGCTAATACAGTTACACAGGGGATTATTTCAAGTCTTAATCGAAATGTTTCTC
TAAAATCTGAAGATGGTCAAGCTATTTCAACAAAAGCCATTCAAACAGATACAGCTATTAACCCTGGTAACTCTGGTGGT
CCACTTGTAAACATCCAAGGACAAGTAATTGGTATAACATCAAGTAAAATTGCAAGTAATGGTGGAACATCTGTAGAAGG
TCTTGGTTTTGCAATTCCTTCAAACGATGCACAAAATATCATTAAACAGCTTGAAAGTGATGGTAAAGTGACTCGTCCAG
CTCTTGGAATTCAAATGGTCAATCTATCAAATGTTGGAGCTAGTGATCTTAGAAAACTTAACATTCCAAGTGGCCTCACT
TCAGGTGTAGTTGTTCGATCTGTTCAAAACAATATGCCAGCAAATGGACATCTTCAAAAATACGATGTCATTACCAAAGT
TGACGATAAAGAGATTGCTTCATCAACAGACCTACAACACGCTCTTTACAATCATGCTATCGGAGATACTATCAAAGTAA
CCTACTACCGTAACGGTAAGGAGGAAACAACCTCAATTAAACTAGATAAGAATTCTGGTGATTTAGAGTCTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mitis NCTC 12261

84.131

100

0.841

  htrA Streptococcus pneumoniae Rx1

83.375

100

0.834

  htrA Streptococcus pneumoniae D39

83.375

100

0.834

  htrA Streptococcus pneumoniae R6

83.375

100

0.834

  htrA Streptococcus pneumoniae TIGR4

83.375

100

0.834

  htrA Streptococcus gordonii str. Challis substr. CH1

66.584

100

0.673

  htrA Streptococcus mutans UA159

54.707

98.992

0.542


Multiple sequence alignment