Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   MP387_RS09125 Genome accession   NZ_CP094226
Coordinates   1875763..1876521 (+) Length   252 a.a.
NCBI ID   WP_242746624.1    Uniprot ID   -
Organism   Streptococcus oralis strain 1648     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1870763..1881521
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MP387_RS09095 (MP387_09095) comE 1871351..1872103 (-) 753 WP_000866079.1 competence system response regulator transcription factor ComE Regulator
  MP387_RS09100 (MP387_09100) comD 1872100..1873419 (-) 1320 WP_242746613.1 competence system sensor histidine kinase ComD Regulator
  MP387_RS09105 (MP387_09105) comC/comC1 1873440..1873565 (-) 126 WP_008282505.1 competence-stimulating peptide ComC Regulator
  MP387_RS09115 (MP387_09115) rlmH 1873847..1874326 (-) 480 WP_242746617.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  MP387_RS09120 (MP387_09120) htrA 1874512..1875705 (+) 1194 WP_242746621.1 S1C family serine protease Regulator
  MP387_RS09125 (MP387_09125) spo0J 1875763..1876521 (+) 759 WP_242746624.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 252 a.a.        Molecular weight: 29038.57 Da        Isoelectric Point: 9.3001

>NTDB_id=668139 MP387_RS09125 WP_242746624.1 1875763..1876521(+) (spo0J) [Streptococcus oralis strain 1648]
MEKFKMISISEIQKNPYQPRKEFDADKLKELAQSIKENGLIQPIIVRQSPVIGYEILAGERRYRASLLAGLTSIPAVVKH
LSDQEMMIQSIIENLQRENLNPVEEARAYESLVEKGFTHTEIADKMGKSRPYITNFIRLLSLPEYILTEVENGKISQAHA
RSLVGLDKEQQDYFFQLIKNEDISVRKLEAILTEKKHKKQKKSDSFIKDEEDKLKKLLGLSVEIKLSKKDTGKIIISFSS
QEEYDRIINSLK

Nucleotide


Download         Length: 759 bp        

>NTDB_id=668139 MP387_RS09125 WP_242746624.1 1875763..1876521(+) (spo0J) [Streptococcus oralis strain 1648]
ATGGAAAAATTTAAAATGATTTCTATCTCTGAAATACAAAAGAATCCTTACCAACCTCGGAAAGAATTTGATGCAGATAA
ACTAAAGGAATTAGCTCAGTCAATCAAAGAAAATGGGCTCATCCAACCAATCATCGTTCGTCAATCTCCTGTAATTGGTT
ATGAAATCCTTGCAGGAGAGAGACGATATCGGGCTTCTCTCTTGGCTGGTCTGACTTCTATTCCAGCCGTTGTAAAGCAC
CTCTCAGATCAGGAAATGATGATCCAGTCAATCATTGAGAATTTGCAGAGAGAAAATTTAAATCCTGTTGAAGAAGCACG
CGCCTATGAATCTTTAGTAGAAAAAGGATTTACTCACACTGAGATAGCGGATAAAATGGGGAAATCTCGTCCTTATATCA
CTAATTTTATTCGTTTGCTTTCCCTACCAGAATATATCTTAACTGAAGTAGAAAATGGAAAAATTTCTCAAGCGCATGCA
CGTTCTCTAGTTGGTTTAGACAAAGAGCAGCAAGACTATTTCTTCCAACTAATCAAAAATGAAGATATTTCTGTGAGAAA
GTTAGAAGCAATTCTTACAGAGAAAAAACACAAGAAGCAGAAAAAAAGTGATTCTTTCATCAAAGACGAAGAAGATAAAT
TAAAAAAACTACTCGGTTTAAGTGTAGAAATTAAACTTTCAAAAAAAGATACTGGAAAGATTATTATCTCCTTTTCAAGT
CAAGAAGAATACGATAGAATTATTAACAGCCTAAAATAA

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(145-191)

ParB/Sulfiredoxin domain (ParB_N)

(6-94)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

50.593

100

0.508

Multiple sequence alignment