Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   MPL11_RS12760 Genome accession   NZ_CP093941
Coordinates   2594861..2596102 (-) Length   413 a.a.
NCBI ID   WP_222693691.1    Uniprot ID   -
Organism   Enterococcus faecium strain NY2032     
Function   facilitate localization of RecA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2589861..2601102
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MPL11_RS12745 (MPL11_12745) proC 2590851..2591657 (+) 807 WP_002303638.1 pyrroline-5-carboxylate reductase -
  MPL11_RS12750 (MPL11_12750) rny 2591736..2593292 (-) 1557 WP_002287336.1 ribonuclease Y -
  MPL11_RS12755 (MPL11_12755) recA 2593703..2594752 (-) 1050 WP_002287328.1 recombinase RecA Machinery gene
  MPL11_RS12760 (MPL11_12760) cinA 2594861..2596102 (-) 1242 WP_222693691.1 competence/damage-inducible protein A Machinery gene
  MPL11_RS12765 (MPL11_12765) pgsA 2596342..2596920 (-) 579 WP_002296025.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  MPL11_RS12770 (MPL11_12770) - 2597129..2598052 (-) 924 WP_002287423.1 RodZ domain-containing protein -
  MPL11_RS12775 (MPL11_12775) - 2598791..2600077 (-) 1287 WP_002287425.1 pitrilysin family protein -

Sequence

Protein


Download         Length: 413 a.a.        Molecular weight: 45385.74 Da        Isoelectric Point: 4.6507

>NTDB_id=665799 MPL11_RS12760 WP_222693691.1 2594861..2596102(-) (cinA) [Enterococcus faecium strain NY2032]
MKAEIIAVGTELLLGQVVNTNATFLSEQLADLGIEVYYQAVVGDNQQRLEELIALAETRSELILLCGGLGPTEDDLTKEA
TAAHLGKSLIQNTEGYKKLLAYFETTHRKMTKNNLQQSQIIEGGVPLPNRTGLALGTFYQTDTHAYILLPGPPNELKPMF
VEQVRPLLEERFPSEEKLISKVLRFYGIGESRLVTELKDLIETQINPTIAPYAKPNEVTLRLTVKTNDVQAGNQALLALE
EKIQERVGEYFYGYGDDNSLAKVVVELLKENKQTVTAAESLTAGAFQAALGDIAGVSEVFPGGFVTYSLQTKAGFLEIDP
ELLAEYGTVSKECVEQMAIQAREIARTDYSVAFTGVAGPDTLEGQSAGTVWIAISSKDGVVSEKYHFARDRAAIRYNAVM
QGFDLLRKQLLRK

Nucleotide


Download         Length: 1242 bp        

>NTDB_id=665799 MPL11_RS12760 WP_222693691.1 2594861..2596102(-) (cinA) [Enterococcus faecium strain NY2032]
ATGAAAGCAGAAATAATAGCTGTCGGAACAGAACTTTTACTAGGACAAGTCGTGAATACGAATGCCACTTTCTTGTCAGA
ACAGCTAGCTGATCTAGGTATCGAAGTTTATTATCAAGCAGTTGTAGGAGATAATCAGCAGCGTTTAGAAGAGTTGATTG
CTCTAGCTGAAACAAGAAGTGAACTCATACTCTTATGTGGCGGATTAGGACCGACAGAAGATGACCTGACAAAAGAAGCA
ACTGCGGCTCACCTCGGTAAGTCTCTCATACAAAATACGGAAGGATACAAAAAATTATTGGCATATTTTGAAACAACCCA
TCGAAAAATGACCAAAAACAATCTGCAACAGTCCCAGATTATCGAAGGCGGGGTTCCTCTACCAAATCGTACAGGGCTTG
CTTTAGGGACTTTTTATCAAACAGATACACATGCGTATATCCTTCTTCCCGGTCCGCCTAATGAGTTGAAACCAATGTTT
GTGGAACAAGTACGTCCTTTACTAGAGGAACGTTTTCCTTCTGAAGAAAAACTAATTTCTAAAGTTTTGCGCTTTTATGG
GATTGGTGAATCGCGACTGGTCACTGAGCTAAAAGATCTGATTGAGACACAGATCAATCCAACGATCGCACCATATGCCA
AACCAAATGAAGTGACATTACGACTGACAGTGAAAACAAATGATGTTCAGGCAGGGAATCAAGCTCTTTTAGCATTAGAA
GAAAAAATCCAAGAACGAGTAGGGGAATATTTTTATGGATACGGCGATGATAATTCGCTAGCAAAAGTCGTAGTGGAACT
ACTGAAAGAAAACAAGCAGACTGTAACAGCAGCGGAAAGTTTGACAGCCGGCGCCTTCCAAGCCGCATTAGGCGACATTG
CTGGTGTATCTGAAGTATTTCCAGGCGGATTCGTTACCTACTCGCTCCAAACAAAAGCTGGTTTTCTGGAGATTGATCCG
GAGCTATTAGCAGAATATGGAACAGTCAGCAAAGAATGTGTGGAGCAGATGGCCATTCAAGCACGTGAGATAGCAAGAAC
AGATTACAGTGTAGCTTTCACCGGAGTGGCTGGACCGGACACGTTAGAAGGTCAATCTGCAGGAACAGTATGGATCGCTA
TTTCATCTAAAGACGGCGTGGTTTCGGAAAAATATCACTTTGCCAGAGATCGTGCTGCTATCAGATATAATGCGGTTATG
CAAGGATTTGATCTTTTGAGAAAACAGCTTTTAAGAAAATGA

Domains

Predicted by InterproScan.

Competence-damaged protein (CinA)

(258-410)

Damage-inducible protein CinA KH domain (CinA_KH)

(180-253)

Probable molybdopterin binding domain (MoCF_biosynth)

(5-169)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Streptococcus mitis SK321

50.952

100

0.518
  cinA Streptococcus pneumoniae TIGR4

50.714

100

0.516
  cinA Streptococcus mutans UA159

51.325

100

0.516
  cinA Streptococcus pneumoniae D39

50.476

100

0.513
  cinA Streptococcus pneumoniae R6

50.476

100

0.513
  cinA Streptococcus pneumoniae Rx1

50.476

100

0.513
  cinA Streptococcus mitis NCTC 12261

50.476

100

0.513
  cinA Bacillus subtilis subsp. subtilis str. 168

47.33

99.758

0.472
  cinA Streptococcus suis isolate S10

41.546

100

0.416