Detailed information NTG0665798

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG714_RS33125
• Genome accession: NZ_CP108728
• Coordinates: 7423161..7424447 (+)
• Length: 428 a.a.
• NCBI ID: WP_033285988.1
• Uniprot ID: A0ABW6MII4
• Organism: Streptomyces sp. NBC_00989
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 7418161..7429447

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG714_RS33095 (OG714_33070)	-	7419080..7419274 (+)	195	WP_026151384.1	hypothetical protein	-
OG714_RS33110 (OG714_33085)	tig	7419958..7421325 (+)	1368	WP_406126539.1	trigger factor	-
OG714_RS33115 (OG714_33090)	clpP	7421667..7422269 (+)	603	WP_406132042.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG714_RS33120 (OG714_33095)	clpP	7422319..7422999 (+)	681	WP_323185329.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG714_RS33125 (OG714_33100)	clpX	7423161..7424447 (+)	1287	WP_033285988.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG714_RS33130 (OG714_33105)	-	7424546..7425544 (-)	999	WP_406126541.1	hypothetical protein	-
OG714_RS33135 (OG714_33110)	-	7425681..7428332 (+)	2652	WP_406126542.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46841.63 Da
• Isoelectric Point: 4.7360

>NTDB_id=665798 OG714_RS33125 WP_033285988.1 7423161..7424447(+) (clpX) [Streptomyces sp. NBC_00989]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQES
AKKALSVAVYNHYKRVQAGENGGGQSREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKLIESRAGAKGIGFGATIRSKRELQAKDQFEDVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILIEPRNALVKQYERLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQGVMYEVPSRKDVARVVIT
ADVVLSNVNPTLIPRDARGRGPGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=665798 OG714_RS33125 WP_033285988.1 7423161..7424447(+) (clpX) [Streptomyces sp. NBC_00989]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGGCCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAAGAACTCGCGGAGACGA
GCGAGGTCCGCTGGGAGGAACTTCCCAAGCCCCGCGAGATCTACGAGTTCCTCGAGGGGTACGTCGTCGGCCAGGAGTCG
GCGAAGAAGGCACTCTCGGTCGCGGTGTACAACCACTACAAGCGCGTCCAGGCAGGTGAGAACGGCGGCGGCCAGAGCCG
CGAGGACGCCATCGAGCTGGCGAAGTCCAACATCCTCCTGCTCGGCCCCACGGGCTCGGGCAAGACCCTCCTCGCCCAGA
CCCTGGCCCGCATGCTGAACGTGCCGTTCGCGATCGCCGACGCAACCGCGCTCACGGAGGCGGGCTATGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTCATCCAGGCCGCTGACTACGACGTCAAGAAGGCCGAGACGGGCATCATCTACATCGA
CGAGATCGACAAGGTGGCTCGCAAGAGCGAGAACCCGTCGATCACTCGTGACGTGTCGGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACGACGGCCTCGGTCCCGCCGCAGGGCGGCCGTAAACACCCCCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGCGCCTTCTCGGGTCTGGAGAAGCTCATCGAGTCCAGGGCCGGCGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGCTCCAAGCGGGAGTTGCAGGCCAAGGACCAGTTCGAGGACGTCATGCCCG
AGGACCTGGTGAAGTTCGGCATGATCCCCGAGTTCATCGGCCGCCTGCCCGTCATCACCTCGGTCCACAACCTGGACCGC
GAGGCCCTGCTCCAGATCCTCATCGAGCCGCGCAACGCACTCGTCAAGCAGTACGAGCGCCTCTTCGAACTCGACGGTGT
GGAGCTGGACTTCGAGCGCGAGGCCCTCGAAGCCATCGCCGACCAGGCCATCCTCCGCCAGACCGGCGCCCGCGGCCTGC
GCGCCATCATGGAGGAAGTCCTCCAGGGCGTCATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGGGTCGTCATCACG
GCGGACGTCGTCCTGTCGAACGTCAACCCGACCCTGATCCCGCGCGACGCCCGAGGCCGCGGCCCGGGCGAGCAGAAGAC
GGCGTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.189	93.925	0.584
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.771	96.028	0.516