Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | MOO40_RS04265 | Genome accession | NZ_CP093308 |
| Coordinates | 859948..860268 (-) | Length | 106 a.a. |
| NCBI ID | WP_241871821.1 | Uniprot ID | - |
| Organism | Aeromonas hydrophila strain AC185 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 854948..865268
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MOO40_RS04245 (MOO40_04250) | - | 855269..855946 (-) | 678 | WP_241871820.1 | DnaT-like ssDNA-binding domain-containing protein | - |
| MOO40_RS04250 (MOO40_04255) | - | 856286..857257 (+) | 972 | WP_017410997.1 | response regulator | - |
| MOO40_RS04255 (MOO40_04260) | - | 857330..858727 (-) | 1398 | WP_011707249.1 | peptide MFS transporter | - |
| MOO40_RS04260 (MOO40_04265) | galU | 858941..859852 (-) | 912 | WP_102988021.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| MOO40_RS04265 (MOO40_04270) | comEA | 859948..860268 (-) | 321 | WP_241871821.1 | ComEA family DNA-binding protein | Machinery gene |
| MOO40_RS04270 (MOO40_04275) | cysQ | 860437..861207 (+) | 771 | WP_241871822.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| MOO40_RS04275 (MOO40_04280) | - | 861287..861583 (-) | 297 | WP_005309589.1 | YciI family protein | - |
| MOO40_RS04280 (MOO40_04285) | - | 861609..862160 (-) | 552 | WP_042067696.1 | septation protein A | - |
| MOO40_RS04285 (MOO40_04290) | - | 862265..863770 (-) | 1506 | WP_241871823.1 | aminotransferase class V-fold PLP-dependent enzyme | - |
| MOO40_RS04290 (MOO40_04295) | - | 863995..864630 (+) | 636 | WP_016351856.1 | hemolysin III family protein | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11228.03 Da Isoelectric Point: 9.5773
>NTDB_id=663398 MOO40_RS04265 WP_241871821.1 859948..860268(-) (comEA) [Aeromonas hydrophila strain AC185]
MNYKTLTATLLLSCLPLLSQPLQAADKPAAKPATTVTATKESGKVNLNTASINELTALKGIGEKKAQAIVDYREKQGKFT
TVDQLADVSGIGPATLEANRDMIIVK
MNYKTLTATLLLSCLPLLSQPLQAADKPAAKPATTVTATKESGKVNLNTASINELTALKGIGEKKAQAIVDYREKQGKFT
TVDQLADVSGIGPATLEANRDMIIVK
Nucleotide
Download Length: 321 bp
>NTDB_id=663398 MOO40_RS04265 WP_241871821.1 859948..860268(-) (comEA) [Aeromonas hydrophila strain AC185]
ATGAACTACAAGACCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCCCTGCTCAGCCAGCCTCTGCAGGCCGCCGACAA
GCCTGCTGCCAAGCCGGCAACCACGGTCACCGCCACCAAGGAGAGCGGCAAGGTGAACCTCAACACCGCCAGTATCAATG
AGTTGACTGCGCTCAAGGGCATTGGCGAGAAGAAGGCTCAGGCCATCGTCGATTACCGCGAGAAGCAGGGCAAGTTCACT
ACCGTGGATCAGCTGGCCGATGTGAGCGGCATCGGGCCAGCCACGCTGGAAGCAAATCGGGACATGATTATCGTCAAGTA
A
ATGAACTACAAGACCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCCCTGCTCAGCCAGCCTCTGCAGGCCGCCGACAA
GCCTGCTGCCAAGCCGGCAACCACGGTCACCGCCACCAAGGAGAGCGGCAAGGTGAACCTCAACACCGCCAGTATCAATG
AGTTGACTGCGCTCAAGGGCATTGGCGAGAAGAAGGCTCAGGCCATCGTCGATTACCGCGAGAAGCAGGGCAAGTTCACT
ACCGTGGATCAGCTGGCCGATGTGAGCGGCATCGGGCCAGCCACGCTGGAAGCAAATCGGGACATGATTATCGTCAAGTA
A
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
50.909 |
100 |
0.528 |
| comEA | Vibrio cholerae strain A1552 |
50.909 |
100 |
0.528 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
44.144 |
100 |
0.462 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
45.918 |
92.453 |
0.425 |
| comEA | Vibrio campbellii strain DS40M4 |
41 |
94.34 |
0.387 |
| comEA | Acinetobacter baylyi ADP1 |
47.059 |
80.189 |
0.377 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
63.492 |
59.434 |
0.377 |
| comEA/celA/cilE | Streptococcus mitis NCTC 12261 |
51.316 |
71.698 |
0.368 |
| comEA | Legionella pneumophila strain ERS1305867 |
39.394 |
93.396 |
0.368 |
| comEA | Legionella pneumophila str. Paris |
39.394 |
93.396 |
0.368 |